| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1516 |
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| Symbol | |
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| ID | 6183540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1320777 |
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| End bp | 1322144 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672046 |
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| Product | NAD(P)(+) transhydrogenase (AB-specific) |
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| Protein accession | YP_001798218 |
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| Protein GI | 171464105 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.15909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.640123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA TAACCGCTAT TTCTTATCTC ATTTCATCGG TGCTGTTCAT TCTCGCATTG
CGCGGCCTGT CCTCACCAAC CACCTCACGC CAAGGCAATA CTTTCGGCAT GATTGGTATG
TTGTTAGCAG TCGTCACCAC CTTCTTTATC CCTGATTTCA AGCCAGTCAT CTCATTGATT
GGTGTTGCGA TTGTGGGCGG CGCCATCATT GGCACATTTG CTGCTAAGCG CGTGCAAATG
ACGAAGATGC CTGAGTTAGT TGCTTTGATG CACTCCTTCG TAGGTTTGTC AGCCGTGTTA
ATTGCGATTG CTGCTGTATT TAATCCAGCA CATGACCATA CTAGTGCCCA GAAGATTGAA
CTCTTTATTG GCGCATTTAT TGGCGCCATT ACCTTTACTG CGTCCGTTAT TGCTTTCGGC
AAATTGTCTG GCAAAGTCAG CGGTAAACCA GTGAGCTTTA CTGGTCAACA CTTACTCAAC
CTGATTTTGG CTGTCTCAAT GGTAGGCGCT GGTATTGCTT ACTACATGGG TGATAGTCAC
GCAGCCTTCT TGGCGATGTG TGCTATTGCT TTAGTTCTAG GCGTGACATT GATTATTCCT
ATCGGCGGTG CCGATATGCC AGTGGTTGTA TCTATGCTCA ATAGCTACTC TGGATGGGCT
GCAGCTGGTA TTGGCTTCAC TTTGAATAAC CCAGTACTGA TTATTGCGGG TGCTTGCGTA
GGCTCTTCTG GTGCGATTCT TTCCTACATT ATGTGTAAGG CGATGAACCG CTCCATTCTC
GCTGTATTGC TTGGCGGCTT TGGTGCTGAA GCTGCTGCAG GCGGCGGTGA TGATGGCGGC
CCTAAGAATT ACAAAACTGG TTCGCCTGAA GATGCAGCCT TCCTTATGGA AAATGCTGAC
ACCGTCATCA TTGTTCCTGG TTATGGTTTA GCAGTTGCTC GCGCTCAGCA CGCCTTGAAA
GAATTAACTG AAAAGTTAAC TCATCATGGT GTTACCGTGA AGTACGCTAT TCATCCGGTG
GCTGGGCGTA TGCCTGGTCA CATGAACGTT CTCTTGGCTG AAGCTGAAGT TCCATACGAT
CAAGTATTCG AGATGGAAGA TATCAACAGT GATTTTGGTC AAGCTGATGT GGTTTTGGTG
CTTGGCGCCA ACGACGTTGT AAACCCAGCA GCACGCACTC CAGGCAGTCC AATCTTTGGT
ATGCCAATCT TGGAAGCATT TAAAGCAAAG ACAATTATTG TTAACAAACG TTCGATGGCT
GCTGGTTATG CAGGCCTTGA TAACGAACTC TTCTACATGG ATAAAACCAT GATGGTCTTC
GGTGATGCGA AGAAGGTCGT TGAGGAGATG GTTAAGGCAG TTGAGTAA
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| Protein sequence | MSNITAISYL ISSVLFILAL RGLSSPTTSR QGNTFGMIGM LLAVVTTFFI PDFKPVISLI
GVAIVGGAII GTFAAKRVQM TKMPELVALM HSFVGLSAVL IAIAAVFNPA HDHTSAQKIE
LFIGAFIGAI TFTASVIAFG KLSGKVSGKP VSFTGQHLLN LILAVSMVGA GIAYYMGDSH
AAFLAMCAIA LVLGVTLIIP IGGADMPVVV SMLNSYSGWA AAGIGFTLNN PVLIIAGACV
GSSGAILSYI MCKAMNRSIL AVLLGGFGAE AAAGGGDDGG PKNYKTGSPE DAAFLMENAD
TVIIVPGYGL AVARAQHALK ELTEKLTHHG VTVKYAIHPV AGRMPGHMNV LLAEAEVPYD
QVFEMEDINS DFGQADVVLV LGANDVVNPA ARTPGSPIFG MPILEAFKAK TIIVNKRSMA
AGYAGLDNEL FYMDKTMMVF GDAKKVVEEM VKAVE
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