| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1506 |
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| Symbol | |
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| ID | 6183446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1309919 |
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| End bp | 1311076 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672036 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001798208 |
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| Protein GI | 171464095 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.966603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAAC CAGTTTACTT CAATATCTTG GCGCGTGACT CCCAAAGCCC GGCGCGACTT
GGTCAGCTTG ACCTTCCGCA TGGTAGCGTG CAGACGCCAA TCTTCATGCC GGTGGGAACC
TATGGCACCG TAAAGGCCAT GACACCGCGT GATTTACATG AAGCTAAAGC ACAAATTATT
TTAGGCAATA CTTTTCATCT ATGGCTAAGA CCTGGATTAG ATGTCATTAA AAAACATGGC
GGCTTACATC GCTTCATGGG ATGGGACAAA CCAATTCTGA CTGACTCCGG CGGCTTTCAA
GTATTTAGTT TAGGAGCATT ACGAAAGATC TCCGAAGAAG GTGTGACTTT TGCATCGCCT
ATTAATGGCG ATAAATTATT TATGTCGCCA GAAGTGTCAA TGGAGATTCA GGCGGTGCTC
AACAGCGATA TCGCCATGCA ATTTGATGAA TGCACTCCGT ACGAGATTAA GGGTCAACCC
ACTTCTGAAA AAACAGCACG CACCTCATTA GAGATGTCGC TTCGCTGGGG CGATCGCTCC
CTCAAACGTT TTCGCGAATT AGAGACTGGT AACGGACTCT TTGGCATCGT CCAGGGCGGC
ATGTTTGAAA ATCTTCGTGA ATTTTCTTTG GACGCTGTCA GTCAACAAGG TTTTGATGGT
ATTGCGATTG GCGGTCTCTC GGTAGGTGAG CCAAAACCGG AGTTTGAATG CATCCTCAAC
TTCACAGCCC CAAAACTGCC AGAACATATG CCCCACTACC TGATGGGTGT AGGCACTCCA
GAAGACTTGA TTTTGGGTGT CAGCTTGGGC ATTGACATGT TCGATTGCGT CATGCCAACT
CGCAATGCCC GCAATGGCTG GCTTTTTACT CGTTTTGGCG ACCTCAAACT ACGTAATTCT
GGGTACAAGG ACGATGATCG CCCTGTAGAC CCTACTTGCG CCTGCTATAC CTGCCAAAAC
TTCACCAGAT CCTATTTAAA TCACCTCCAA AAGGCGAATG AAATCCTAGG ATCCCAACTC
AATACCATCC ATAACCTGTC CTACTACCTC CAGCTCATGA CCGAAGTTCG CGAGGCACTC
AGCAAGGACC GTTTTAGCGC CTATCGAGAA GAATTTCACA GTAATCGCCA GCGTGGCGTT
GAGCCCGGAC AGGACTAA
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| Protein sequence | MTKPVYFNIL ARDSQSPARL GQLDLPHGSV QTPIFMPVGT YGTVKAMTPR DLHEAKAQII
LGNTFHLWLR PGLDVIKKHG GLHRFMGWDK PILTDSGGFQ VFSLGALRKI SEEGVTFASP
INGDKLFMSP EVSMEIQAVL NSDIAMQFDE CTPYEIKGQP TSEKTARTSL EMSLRWGDRS
LKRFRELETG NGLFGIVQGG MFENLREFSL DAVSQQGFDG IAIGGLSVGE PKPEFECILN
FTAPKLPEHM PHYLMGVGTP EDLILGVSLG IDMFDCVMPT RNARNGWLFT RFGDLKLRNS
GYKDDDRPVD PTCACYTCQN FTRSYLNHLQ KANEILGSQL NTIHNLSYYL QLMTEVREAL
SKDRFSAYRE EFHSNRQRGV EPGQD
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