| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1487 |
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| Symbol | hrcA |
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| ID | 6183475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1287021 |
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| End bp | 1288031 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672021 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001798193 |
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| Protein GI | 171464080 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAC GTTCCCGCGC CCTTCTCAAA ATCCTCATCG AGCGCTATAT CGAGGAGGGT
CAGCCTATTG GCTCTCGCAC TCTATCTAGA TACTCGGGTT TAGATCTGTC GGCAGCCACC
ACACGCAATG TGATGGCGGA TTTGGAGGAT ATGGGCTTAG TGACCAGCCC TCATACCTCT
GCTGGACGCA TCCCCACGCC CCGGGGCTAC CGTTTGTTTG TGGACACCAT GGTGACGGTG
CGCCCCTTGG AGGCGATAGC TGCTAGAGAA GTTGAAAAAG GCCTTTTGCC GGACTCTCCG
CAGCGGGTTC TAACCTCTGC AGCGCAAATT TTGTCAAACT TGACGCATTT CGCTGGTGTC
GTGATGACCC CTAAGCGAGC TCAGGTTTTT AAGCATATTG AATTCTTACG CCTAGGCGAA
GGCAAGATTT TGTTAATCAT GGTCACGCCG GAGGGTGATG TGCAAAATCG CATCTTGCCA
ACAACCCAAG ATTATACGCT GAGCCAACTC ATTGAGGCAG GTAACTTTAT TAACACGCAT
TTTGCTGGAA AAAGTTTTGA TCAGGTACGC ATGCATTTGA AATCTGATTT AGATAATTTG
CGAGCTGATA TTTCTGGTTT GATGGCTCTG GCATTGCAAA ACGGCGTTGC TGATTACGAT
ATGAGTCGAG GCGACGTAGT GCTATCAGGC GAACGTCGCT TGCTGAATGT TGGAGATTTA
AGTTCCAATT TGGATAAGTT GCGCAAGATG TTTGACATGT TGGAGCGAAA ATCAGTACTC
ATGCAGTTGC TTGATGTATC GAGTCATGCC GATGGCATTC AAATTTTTAT TGGTGGTGAG
AGTGACTTAT TGCCCTATGA AGATCTGGCC GTGATCAGCG CCCCATATAG CGTTGATGGT
CAGATCGTTG GAACGCTTGG GGTAATTGGA CCAACTCGCA TGGCTTATGA CAGAGTTATT
CCTATTGTCG ACATCACCTC TAAATTGCTT TCCGGCGCAC TAAGCTCTTG A
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| Protein sequence | MDERSRALLK ILIERYIEEG QPIGSRTLSR YSGLDLSAAT TRNVMADLED MGLVTSPHTS
AGRIPTPRGY RLFVDTMVTV RPLEAIAARE VEKGLLPDSP QRVLTSAAQI LSNLTHFAGV
VMTPKRAQVF KHIEFLRLGE GKILLIMVTP EGDVQNRILP TTQDYTLSQL IEAGNFINTH
FAGKSFDQVR MHLKSDLDNL RADISGLMAL ALQNGVADYD MSRGDVVLSG ERRLLNVGDL
SSNLDKLRKM FDMLERKSVL MQLLDVSSHA DGIQIFIGGE SDLLPYEDLA VISAPYSVDG
QIVGTLGVIG PTRMAYDRVI PIVDITSKLL SGALSS
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