Gene Pnec_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1485 
Symbol 
ID6183672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1285271 
End bp1285819 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID641672019 
Productheat shock protein GrpE 
Protein accessionYP_001798191 
Protein GI171464078 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG AAAATCAAAC CCCACCCCCA GAGCAAGAAA ATCTTGCCGC AGATCCGGCC 
GTCGAAACTA CGGCAGAAAC TCCGGCTGTA AAAACGCCAG AACAAGAAGT CGCTGAGCTC
AATCAAAAGA TTGGCGAGTT ACAAGATAAT TTTTTACGCG CAAAAGCGGA AGGTGAAAAT
ATTCGCCGTC GCGCCGTAGA GGATATTGCC AAGGCGCACA AATTTGCGAT TGAGAGTTTT
GCTGAGCATT TGGTGCCGGT AACCGATAGT CTTTATGCAG CCCTTAATAC TGATGCTGGT
GATGCCAAGG CGTTTAAAGA GGGTTTGGAA ATCACTCTCA AGCAATTGCT CTCTGCATTT
GAAAAGGGTC GCATGACTGA AATTAACCCT GCGGTTGGTG ATAAGTTTGA CCCTCATCAT
CACCAGGCGA TTGCTTCAGT GCCTTCTGAG CAAGAATCGA ATACCGTGGT TTCAGTGCTG
CAACGTGGTT ATACGGTGGC TGATAGGGTC CTAAGACCGG CTTTGGTGAC GGTTAGCGCC
CCAAAATAA
 
Protein sequence
MTQENQTPPP EQENLAADPA VETTAETPAV KTPEQEVAEL NQKIGELQDN FLRAKAEGEN 
IRRRAVEDIA KAHKFAIESF AEHLVPVTDS LYAALNTDAG DAKAFKEGLE ITLKQLLSAF
EKGRMTEINP AVGDKFDPHH HQAIASVPSE QESNTVVSVL QRGYTVADRV LRPALVTVSA
PK