Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1485 |
Symbol | |
ID | 6183672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1285271 |
End bp | 1285819 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641672019 |
Product | heat shock protein GrpE |
Protein accession | YP_001798191 |
Protein GI | 171464078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG AAAATCAAAC CCCACCCCCA GAGCAAGAAA ATCTTGCCGC AGATCCGGCC GTCGAAACTA CGGCAGAAAC TCCGGCTGTA AAAACGCCAG AACAAGAAGT CGCTGAGCTC AATCAAAAGA TTGGCGAGTT ACAAGATAAT TTTTTACGCG CAAAAGCGGA AGGTGAAAAT ATTCGCCGTC GCGCCGTAGA GGATATTGCC AAGGCGCACA AATTTGCGAT TGAGAGTTTT GCTGAGCATT TGGTGCCGGT AACCGATAGT CTTTATGCAG CCCTTAATAC TGATGCTGGT GATGCCAAGG CGTTTAAAGA GGGTTTGGAA ATCACTCTCA AGCAATTGCT CTCTGCATTT GAAAAGGGTC GCATGACTGA AATTAACCCT GCGGTTGGTG ATAAGTTTGA CCCTCATCAT CACCAGGCGA TTGCTTCAGT GCCTTCTGAG CAAGAATCGA ATACCGTGGT TTCAGTGCTG CAACGTGGTT ATACGGTGGC TGATAGGGTC CTAAGACCGG CTTTGGTGAC GGTTAGCGCC CCAAAATAA
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Protein sequence | MTQENQTPPP EQENLAADPA VETTAETPAV KTPEQEVAEL NQKIGELQDN FLRAKAEGEN IRRRAVEDIA KAHKFAIESF AEHLVPVTDS LYAALNTDAG DAKAFKEGLE ITLKQLLSAF EKGRMTEINP AVGDKFDPHH HQAIASVPSE QESNTVVSVL QRGYTVADRV LRPALVTVSA PK
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