Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1483 |
Symbol | |
ID | 6182946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1281981 |
End bp | 1283102 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641672017 |
Product | chaperone protein DnaJ |
Protein accession | YP_001798189 |
Protein GI | 171464076 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.387506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTAAAA GTAACCGCGA TTTTTATGAA GTACTTGGTG TAGCAAAAGG CGCTAACGAC GAAGAGCTAA AAAAGGCTTA TCGCAAACTG GCAATGAAGT ACCACCCCGA TCGCAATCCC GATAGCAAAA CATCAGAAGC TCAATTTAAA GAAGTTAAGG AAGCATACGA AACCTTAACC GACCCCAATA AGCGCGCCGC TTATGACCAA TATGGTCATG CTGGGGTTGA CCCTTCCATG GGCGGTGGTT TCGGTGGCGG TGGATTTGCT GATGCGTTTG GCGATATCTT CGGCGATATC TTCGGACAAG GCGGAGGTCG TCAATCTGGT CCTCAAGTCT ATAAGGGTGC TGACTTGCGC TACAACATGG ATATCACGCT TGAGCAGGCA GCGGAAGGAT ATACCACTCA AATTCGTGTG CCAAGCTGGA GTAATTGCAA GCCGTGTCAC GGTACAGGTG CGGAGCCAGG ATCTAAGGCT GAGACATGCA CCACTTGTAA TGGTCACGGT CAGGTACGCG TACAGCAGGG CTTTTTTTCA ATGCAACAAA CTTGTCCTAA GTGTCGCGGC ACTGGCGAGT ACATTCCAAA GTCTTGCAAA ACGTGTCATG GAACTGGAAA ACACAAAGAA CAAAAAACGC TCGAGATCAA AATACCTGCA GGTATTGATG ACGGCATGCG CGTGCGTTCT GTTGGTAATG GCGAGCCCGG AATTAATGGT GGCCCAGCGG GTGACCTCTA TGTAGAGGTG CGAGTGAAGC CTCATAAAGT ATTTGAGCGT GATGGTAATG ATTTGCATGT TCAAATGCCA ATCTCTTTTG CGACTGCAAC GATTGGTGGT GAAATCGAAG TGCCCACTTT GTCGGGCCGC GTAGAGTTTC CAATTCCCAA TGGTACGCAA ACTGGTAAAA CATTTCGCTT GCGCAATAAA GGAATTAAAG GGTTGCGCTC AACTTTGGTA GGCGATCTCT TTGTTCATGT TCTGGTCGAG ACGCCAGTGA AGTTGACTGA TGAGCAGAAG AAACTGCTGC AGAAGTTTGA TGAAAGTCTG AAATCTGGCG GTGACAAACA TAGCCCTCAG CAAAAGGGAT GGTTTGACAG TGTAAAGAGC TTCTTTAGCT AG
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Protein sequence | MPKSNRDFYE VLGVAKGAND EELKKAYRKL AMKYHPDRNP DSKTSEAQFK EVKEAYETLT DPNKRAAYDQ YGHAGVDPSM GGGFGGGGFA DAFGDIFGDI FGQGGGRQSG PQVYKGADLR YNMDITLEQA AEGYTTQIRV PSWSNCKPCH GTGAEPGSKA ETCTTCNGHG QVRVQQGFFS MQQTCPKCRG TGEYIPKSCK TCHGTGKHKE QKTLEIKIPA GIDDGMRVRS VGNGEPGING GPAGDLYVEV RVKPHKVFER DGNDLHVQMP ISFATATIGG EIEVPTLSGR VEFPIPNGTQ TGKTFRLRNK GIKGLRSTLV GDLFVHVLVE TPVKLTDEQK KLLQKFDESL KSGGDKHSPQ QKGWFDSVKS FFS
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