| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1480 |
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| Symbol | |
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| ID | 6183142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1279137 |
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| End bp | 1280537 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641672015 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_001798187 |
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| Protein GI | 171464074 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.976033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACTA AATTTATCAA GCGTATTTTG CGGCGTGACC CAATGGTTAA GCACACCCAA
GCTAACAATA CCGGCGCGCC AAAACACATA CCCAAGAAAG CACACCGCAT TGACCCTCAC
TTGCTTTCTA AGAATGCAGT AAAAGTGACG CACACCTTGC AGCAAGCTGG CTATGAAGCA
TTTATTGTTG GAGGCGCTGT TCGAGACCTC GCGCTAGGAA TTAGCCCAAA AGATTTTGAC
GTTGCAACAA ATGCTACACC AGATCAAGTA CAAAGACTGT TTAGAAAAGC GCGGCTCATT
GGGCGTCGCT TTCAAATTGT TCACGTGACC TTTTTTGGCA AGGGTCATCC AGAAATCATT
GAAGTATCAA CCTTCAGAGC CCTACTGGAT AACGCTGGAG ACCATGTGGC AGAAAGTGGT
CGCATCTTGC GTGACAACGT CTGGGGATCC CAGGGCGAAG ATGCTGCAAG ACGCGACTTT
ACGATCAATG CCATGTATTA CGACCCCTCC TCTGAGACTG TGCTCGACTA TCACGGCGGT
ATGGCGGATA TGCAAAAGAA AACTTTGCGC ATGATTGGTG ACCCGGCCAA GCGCTATCGC
GAAGATCCGG TGCGGATGCT AAGAGCAGTT CGATTTGCCG CCAAAACTGG ATTTGAATTA
GACAACGCTA CGCGCGCGCC GATTGTTAAG CTTGGCAAAC TATTAAGCGA TATTCCTTCT
GCTCGATTGT TTGACGAAAT CCTCAAGCTT TTAATGTCCG GATACTCTTG GCGAGTCATC
CAAGGCTTAA AAGCGGCAGG ACTCCATCAT GGCTTGCTGC CATTACTGGA TCACATTTTG
GATGATGACG AGGGCTCCAA AAGCGCTAAT GATTTTGTAA AGCTTGCCTT GGCAAGCACT
GACGAACGCA TTCAATCAGG TAAAAGTGTT TCGGCTGGCT TTTTGTTTGC CACTCTGCTT
TGGCCTGATC TATTAAAAAA CTGGAAAGCC AATTCCAGCA AAGGTATGGC TAATATCCCT
GCTCTTCAAG ATGCCATGGA TGATACGATC GCCACTCAAA GTAGTGGCAT GACTATTCAA
CGTCGTTTTG AAAGCGATAT GCGTGAAATT TGGTCCATGC AACCGCGCTT TGAAAGACGT
GTAGGGCGCT ACCCTCACCG CCTCATCGAA TCTCCCCGCT TTCGGGCAGG TTATGACTTT
ATGTTGCTCC GTTGTGCTAC CGGGGAATTA AATCCCGCTA TAGGCCAGTG GTGGACTAAC
TTCATTGCTG CCGATCCCGC TGGGCAAGAG GAACTCATGG CTAGCGTTAA AAATGAATCT
GGGAACAGCC CCAGCCCCGC CAAAAGAAGG CGCCGCAGAA AGCCGAAATC AGCACTGCCT
TCAGAGGGTG CAACAAGCTA A
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| Protein sequence | MITKFIKRIL RRDPMVKHTQ ANNTGAPKHI PKKAHRIDPH LLSKNAVKVT HTLQQAGYEA
FIVGGAVRDL ALGISPKDFD VATNATPDQV QRLFRKARLI GRRFQIVHVT FFGKGHPEII
EVSTFRALLD NAGDHVAESG RILRDNVWGS QGEDAARRDF TINAMYYDPS SETVLDYHGG
MADMQKKTLR MIGDPAKRYR EDPVRMLRAV RFAAKTGFEL DNATRAPIVK LGKLLSDIPS
ARLFDEILKL LMSGYSWRVI QGLKAAGLHH GLLPLLDHIL DDDEGSKSAN DFVKLALAST
DERIQSGKSV SAGFLFATLL WPDLLKNWKA NSSKGMANIP ALQDAMDDTI ATQSSGMTIQ
RRFESDMREI WSMQPRFERR VGRYPHRLIE SPRFRAGYDF MLLRCATGEL NPAIGQWWTN
FIAADPAGQE ELMASVKNES GNSPSPAKRR RRRKPKSALP SEGATS
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