| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1479 |
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| Symbol | |
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| ID | 6183625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1278460 |
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| End bp | 1279140 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672014 |
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| Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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| Protein accession | YP_001798186 |
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| Protein GI | 171464073 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTCAGC TAGCCCTTTT CGATTTAGAC CACACCCTAT TACCTTGCGA CAGCGATTAT
GAATGGGGCC AATTTTTGGC TCGCATTGGC GTAGTTGATA GCGAATACCA CGCAAGACAG
AACGAGCGCT TCTATCAAGA CTACAAAGAG GGCAAACTCG ATATTCATGA ATTTCTGCGC
TTTGCCTTAA AACCGCTTTC CGAACACTCG CGCGCACAAC TGAAAGAGTG GCATGATGCC
TTCATGACGG AGGTGATCAA CGGCCAACTC CGACAAGAAG CCCTTGATTT AGTCAAACGT
CACCAAGATG CGGGGGATCT CTGCTGTGTG ATTACAGCTA CCAATAGCTT TGTAACCCGC
CCGATTGTCG AAAGTTTTGG CATTGAGCAT TTGATTACCA CAGAACCTGC TACCACTAAC
AACCAGCCTT TGGCCAATTA CACTGGCGAG GTCAAGGGCA TCCCTAATTT TCGAGAAGGC
AAAATTCAGA ACTTGTATGA CTGGCTAGCC TTTCAAAATC TGTCGCTAGG CACCCTGCCT
TACAGTTATT TTTATTCTGA CTCGATGAAT GATCTACCTT TACTTGAAAA GGTCAGTCAT
CCTGTCGCCA CCAATCCAGA TGATCGTCTT CACAACGAAG CTAAGCAGCG CAACTGGCCT
ATTCTTGAAT TGTTTGCATG A
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| Protein sequence | MTQLALFDLD HTLLPCDSDY EWGQFLARIG VVDSEYHARQ NERFYQDYKE GKLDIHEFLR
FALKPLSEHS RAQLKEWHDA FMTEVINGQL RQEALDLVKR HQDAGDLCCV ITATNSFVTR
PIVESFGIEH LITTEPATTN NQPLANYTGE VKGIPNFREG KIQNLYDWLA FQNLSLGTLP
YSYFYSDSMN DLPLLEKVSH PVATNPDDRL HNEAKQRNWP ILELFA
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