| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1475 |
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| Symbol | |
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| ID | 6184309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1274525 |
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| End bp | 1275529 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672010 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001798182 |
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| Protein GI | 171464069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACTG AACCCTACAT TCAACCCATG CATGTCCTAA ACGAAGCCCC CATTCTTTGT
ATTGTTGGAC CCACCGGTGC AGGCAAAACC CATCTCGCCA TGTCCTTGGC TGAGCATGCC
AAATCCATAG GCTTAACAAT TGAACTTATT AGCATGGATT CTGCACTGGT CTATCGCGGT
TTAGATATTG GTAGCGCCAA ACCCACCAAG GCCGAACAAG ATGCCTTCAT ACATCATCTG
ATTGACATCA TCGACCCCAC TGAAGTGTAT TCAGCCGCTC GATTTGCGAA CGATGCGAAA
CGACTATGCT TAGAAATTCG TGAACGCGGT AATGTTCCCG TAGTAGTTGG AGGAACGATG
TTGTATTGGC GCGCTTGGGC TCATGGACTC TCTTCGCTGC CGCCTGCTAA TTCAGAAATT
CGCGCCCGTC TGGATGAAGA AGGTAAATCG ATTGGCTGGC CTGCAATGCA TGACAAGCTT
GCGAAAGTAG ACCCCGAAAC TGCGGCTCGC TTAAAGCCAA ATGATTCTCA ACGAGTACAG
CGCGCTCTAG AAGTTTTTGA AATTATCGGC AAACCCATGT CAGTGTTGTT AGCAGATTCG
CCGAGTGAAG ATGGCAGAGA AGGCTCCGCT ATTCCATCGT GGATTGATTT AATTTCGCTT
GAACCTCGTG ATCGTAAACG CTTGCATCTC AACTTAGAAA AGCGGTTTGA TGAAATGCTC
ACTGCTGAAT TTATGAATGA AGTAAAAGCA TTGCACGCTA ACACTAGATT GCATACTGAC
CTACCAGCGA TTCGCTCAGT CGGCTATCGC CAAGCTTGGG AATTTCTGAA TGGCGAGATT
GATGCTGAAC AAATGCGCTA CAAAGCATTG GTAGCAACCA GGCAGCTTGG CAAACGTCAG
CTCACTTGGC TGCGTGCAAT AGAGGGAAGA AAAACATTTG ACCCCTTCAA CCCCGAAGAG
TTGAAGGCGG CTCTAGATTA CTGCAAGAGT AATTTAAAGA AATAA
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| Protein sequence | MPTEPYIQPM HVLNEAPILC IVGPTGAGKT HLAMSLAEHA KSIGLTIELI SMDSALVYRG
LDIGSAKPTK AEQDAFIHHL IDIIDPTEVY SAARFANDAK RLCLEIRERG NVPVVVGGTM
LYWRAWAHGL SSLPPANSEI RARLDEEGKS IGWPAMHDKL AKVDPETAAR LKPNDSQRVQ
RALEVFEIIG KPMSVLLADS PSEDGREGSA IPSWIDLISL EPRDRKRLHL NLEKRFDEML
TAEFMNEVKA LHANTRLHTD LPAIRSVGYR QAWEFLNGEI DAEQMRYKAL VATRQLGKRQ
LTWLRAIEGR KTFDPFNPEE LKAALDYCKS NLKK
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