| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1465 |
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| Symbol | |
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| ID | 6183463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1267116 |
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| End bp | 1267319 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672001 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_001798173 |
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| Protein GI | 171464060 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000499386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 0.887495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACCG GAATTGTTAA GTGGTTCAAT GATGCAAAAG GTTTTGGCTT TATCAAACCT
GATGATGGTG AAGAAGAGTT GTTCGCGCAT TTCAGCGCAA TTACTATGCC TGGGTTCAAA
ACCCTTAAGG AAAACCAAAA GGTAACGTTT GACATTACCC AAGGCCCTAA AGGCAAACAA
GCTACCAATA TCCAAGCGGC TTAA
|
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| Protein sequence | MATGIVKWFN DAKGFGFIKP DDGEEELFAH FSAITMPGFK TLKENQKVTF DITQGPKGKQ
ATNIQAA
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