| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1444 |
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| Symbol | |
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| ID | 6183346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1246979 |
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| End bp | 1247692 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671984 |
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| Product | ABC transporter related |
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| Protein accession | YP_001798156 |
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| Protein GI | 171464043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCT TACTCAAGAT AAAAGATCTC AAGGTTTCTT ATGGTGGCAT CAATGCGGTC
AAGGGCACTG ATTTGCATGT CAACCATGGT GAGCTTGTTG CTTTGATTGG CGCGAATGGT
GCTGGGAAAA GCTCGACCCT AAAAGCGATT GCGGGCTTGC TGACGCCGGC ATCTGGTGAG
ATTAAGTTTT TGAGCCAGCA AACTAAAAAA TTGCCCGCAT ATGAATTGGT TCGACTGGGA
TTAGGTATGG TTCCGGAGGG GCGCGGCGTA TTTAAGCGCA TGACAATTTT GGAGAATCTC
CAAATGGGTG CTTACTTAAA AACAAATACC AAGGATATCG AGCTCAAATT GGAAGAGGTG
TATTCGTATT TTCCACGGCT AAAAGAACGT CTTTCTCAGT TGGCGGGAAC ACTTTACGGT
GGTGAGCAGC AAACGGTCGC CATGGGCAGG GCAATGATGG CTGAACCAAA GTTGCTGCTG
CTAGATGAGC CCTCTATGGG TTTGTCTCCC ATCATGGTTG AGACGATTTT TGATGTTGTT
CGTAGCCTAT CGGCTAGTGG AATGACTATT TTACTGGTAG AACAAAATGC ACGTCTAGCT
CTACAGATGG CAGATCGCGC TTATGTCATG GAAAGTGGTT TGATAACACT TAGCGGGTCC
GGCAAAGAGT TGCTCGAAGA TCCAAGAGTT AGGGTCGCCC ACTTAGGTGA GTAA
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| Protein sequence | MGALLKIKDL KVSYGGINAV KGTDLHVNHG ELVALIGANG AGKSSTLKAI AGLLTPASGE
IKFLSQQTKK LPAYELVRLG LGMVPEGRGV FKRMTILENL QMGAYLKTNT KDIELKLEEV
YSYFPRLKER LSQLAGTLYG GEQQTVAMGR AMMAEPKLLL LDEPSMGLSP IMVETIFDVV
RSLSASGMTI LLVEQNARLA LQMADRAYVM ESGLITLSGS GKELLEDPRV RVAHLGE
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