| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1421 |
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| Symbol | |
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| ID | 6183440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1217778 |
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| End bp | 1218605 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671962 |
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| Product | protein of unknown function DUF198 |
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| Protein accession | YP_001798134 |
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| Protein GI | 171464021 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1469] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA TGAACCCCGC TTTTTTGAAG TCTAGCGCAA TGCCTGATGT GCAATCCACT
CGGGATGAGC GCGCTCTGCC AATTGAACAG GTAGGTATTC GTGGCGTGCG TCATCCACTC
ACAATTCGTA GCAAGACTGG TAACTTTCCA TCGGTAGGTA CATTTGAAAT GGATGTTGCT
TTGCCTGCGC ATGTGAAGGG CACGCATATG TCGCGCTTCA TGGCTTTGTT GCAAAAGCAA
GATATCGTGG TTGATAGCAC TTCAGTAGTG GCAATGGCTC GCGAGATGTT GCCCTTGCTT
GATGCAAAAG AAGGCCACGT GCAATTTACT TATACTCACT TTGTGAAAAA AGCAGCGCCA
GTTTCTGGCG TGGAAAGCTT GATGGATTAC AAAGTGACTT GGATGGCCAC TGTCAAACAA
AATGCCAATG GCAATGCTGA CGTGGAATTA GGTTTGCGTG CGCAAGTTCC TGTGATGAGT
TTGTGCCCTT GCTCAAAAGA AATTTCTGCT TTTGGTGCCC ATAATCAACG CTCTCATGTC
ACGATGTCGG TAGTGCTTGA TGTTGAAACA AAAATGACGG TTGAAGATTT GGTGGCCGCT
GCTGAAAGTG AAGCGTCTAG CGAATTGTGG GGATTGCTCA AGCGACCTGA TGAGAAGTGG
GTTACCGAGC GCTCTTATAG TAATCCAAAA TTTGTCGAAG ACTTAGTACG TGATGTGGCA
GGCAATCTCA AGGCAGATCA ACGTATTCGG TCGTTTGTAG TTGAGGCTGA AAACTTTGAG
TCTATTCATA ACCACAGCGC ATTTGCCCGT ATTAGTCTTC AGAAATAA
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| Protein sequence | MNDMNPAFLK SSAMPDVQST RDERALPIEQ VGIRGVRHPL TIRSKTGNFP SVGTFEMDVA
LPAHVKGTHM SRFMALLQKQ DIVVDSTSVV AMAREMLPLL DAKEGHVQFT YTHFVKKAAP
VSGVESLMDY KVTWMATVKQ NANGNADVEL GLRAQVPVMS LCPCSKEISA FGAHNQRSHV
TMSVVLDVET KMTVEDLVAA AESEASSELW GLLKRPDEKW VTERSYSNPK FVEDLVRDVA
GNLKADQRIR SFVVEAENFE SIHNHSAFAR ISLQK
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