| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1360 |
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| Symbol | |
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| ID | 6183856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1172658 |
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| End bp | 1173584 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671912 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001798085 |
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| Protein GI | 171463972 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.240618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACT TTCTTGGTGC CGGTTGGAGT GCCTATATCG CTCTAGTAAC ATTGGTCGGT
ATTTTTTGGT GCGTCTGGTT ATTATTTTCT CAACTCAAAG TAAAGGTAAA GCTCAAGCCG
GATGGCGATG TGGCTGACAC CGGTCACGTT TGGGATGATG ATTTGCGTGA ATTAAGTAAT
CCATTGCCAC GTTGGTGGAT GTGGATGTTC TTGATTTCTT GCATCTTCGG TTTGGTGTAT
TTAGTTTTGT ATCCAGGCCT AGGCTCTTAT CCAGGTGTTT TGGGTTACAG CACTGATGGC
GCTTTGATGC AGTCTATGAC TAGTGCTAAC GATGAACTCA AGCCTGTCTA TGCCAAATAC
GTGAAGATGG ATGTAGAGCA AGTTGCCGCT GATCCAAAGG CGCGTGAAAT GGGTCAACGT
TTATTCCTAA ATTCATGTGC GCAATGTCAC GGCTCTGATG CTGGTGGCGC AAAAGGCTTT
CCAAACTTAA CTGATGGCGA TTGGCTCTAC GGCGGCTTAC CAGAAAACAT TAAAGCTTCT
ATTGTTAATG GCCGTGCTGG TGTAATGCCT CCATTCCCAC AATTGGATAG CAAGCAGATT
GTGGATGTCG CTAACTATGT ACGTAGCCTC TCTGGGTTGC CTGCAGACGA CCTCAAAGCA
GCTCGTGGAG CTGAGGTATT TAAGGCCAAT TGTGCTGCAT GCCATGGTCC TGAGGGTAAA
GGGAATATTG CTTTAAGCGC ACCGAATTTA ACTGACAAAG TTTGGTTATA TGGTGCTTCA
GAGGCAACTA TTGTTGAGAC TGTAACTAAG GGTCGTATGG CACAAATGCC TGCTCAAGAC
AAAGTATTGA GTCCTGAGAG GATTCAGCTA TTAACGGCTT ATGTCTGGGG TTTATCTAAT
AATAAACAGC CAGCAGCAGC TAAGTAA
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| Protein sequence | MSDFLGAGWS AYIALVTLVG IFWCVWLLFS QLKVKVKLKP DGDVADTGHV WDDDLRELSN
PLPRWWMWMF LISCIFGLVY LVLYPGLGSY PGVLGYSTDG ALMQSMTSAN DELKPVYAKY
VKMDVEQVAA DPKAREMGQR LFLNSCAQCH GSDAGGAKGF PNLTDGDWLY GGLPENIKAS
IVNGRAGVMP PFPQLDSKQI VDVANYVRSL SGLPADDLKA ARGAEVFKAN CAACHGPEGK
GNIALSAPNL TDKVWLYGAS EATIVETVTK GRMAQMPAQD KVLSPERIQL LTAYVWGLSN
NKQPAAAK
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