| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1339 |
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| Symbol | |
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| ID | 6183423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1154884 |
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| End bp | 1155546 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671896 |
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| Product | peptidase M50 |
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| Protein accession | YP_001798069 |
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| Protein GI | 171463956 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.000000024793 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTACTG ACTATTCTAT TCAAGCTGTC GCCATTAATG CGATTCCTCT GATTTTTGCC
ATCACCATCC ACGAAGCAGC CCATGGCTAT GCCGCCCGCA AATTTGGCGA TAACACCGCC
TACATGCTGG GGCGAGTCAG TCTAAATCCC GCCAAACATA TAGACTCTGT AGGAACCATC
TTAATTCCCC TAGCCTTAAT TTTGACTGGG TCGCCTTTTT TAGTTGGCTA CGCCAAGCCA
GTACCAGTGA ATTTTGGGCG CCTCAGAAAC CCCAGAATTG ATTCCATTTG GGTTGCCCTG
GCAGGACCAG GCTCAAATTT CATCCAGGCA CTTATCTGGC TCATTCTCCT GATAGGTTTA
GTAGGGTTTG GAGTAAATGA AAAGTTTCTA ATCTCCATGT CTCAAGCTGG CATCACTTGG
AACCTGGGCC TACTGGTATT TAACCTCTTT CCTTTGCCAC CCCTGGATGG GGGTCATATT
CTCGCCAGCC TACTTCCTGT CCGCCAATCG ATTGCACTTG GCAAGCTAGA GCCTTGGGGC
TTTTTTATAG TCTTGGGGCT TGTATTTACA GGAATCATTG GCACCCTATG GATGCAACCC
TTGATGAGTT TTTTTGAATG GCTCATCCTC ATGCTAACTA GCCCCTTAAG AATGATTTTT
TAA
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| Protein sequence | MITDYSIQAV AINAIPLIFA ITIHEAAHGY AARKFGDNTA YMLGRVSLNP AKHIDSVGTI
LIPLALILTG SPFLVGYAKP VPVNFGRLRN PRIDSIWVAL AGPGSNFIQA LIWLILLIGL
VGFGVNEKFL ISMSQAGITW NLGLLVFNLF PLPPLDGGHI LASLLPVRQS IALGKLEPWG
FFIVLGLVFT GIIGTLWMQP LMSFFEWLIL MLTSPLRMIF
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