| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1310 |
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| Symbol | |
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| ID | 6183780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1132672 |
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| End bp | 1134000 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671871 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001798044 |
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| Protein GI | 171463931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000000144517 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGGTT TGCCTGATAT TCAGATTGGA CCTTTTAAGC AAGCGCAAGG CTCGATTGTT
TTGCCAGGCT CAAAGAGTAT TTCTAATCGC GCACTGCTGC TTGCAGCGTT GTCCACGGGC
ACGACTACCC TCAAGAATTT GCTGGATGCA GACGACACTC AAGTAATGCG TAATGCCCTG
CGACAGTTGG GTCTGTCTGT GATTAATAAA GAGAATAAGG CCTGCATCGT TGAGGGCTGT
GGCGGTAAGC TCCCTGTGCA GGAAGCTGAT CTTTTTATGG GTAATGCCGG TACGGCCATA
CGTCCGCTCA CGGCAGCCTT AGCAATGCAA GGTGGCAACT ATCGTTTGTC TGGTGTAGCG
CGTATGCGTG AAAGACCGAT TCGGGATTTG GTGGATGGTT TGCGCCAAGT GGGCGCAAAG
ATTGGATACG AACTACAAGA AGGTTATCCA CCCATCAAAA TCTTAGCTGC GGATATTCAA
ATTAAAGATG TTGTTAAGGT GCGTGGTGAT GTGTCAAGCC AATTCTTAAC AGCATTACTG
ATGGCTTTGC CTTTGGTTGC GAATGAGCCA GTTCGCATTG AGGTGATTGG CGAACTTATT
TCTCGTCCGT ACATTGATAT CACTCTGAAG CTTATGGCGC GTTTTGGCGT CACGGTAGCT
TGCCCTGATA TGCAATCGTT TGTTATTCCA GCAAAAACAT CAGGCGCTGT GTACAAGAGC
CCGGGTCAGT TATTGGTTGA GGGGGATGCC TCTTCAGCCT CTTACTTCTT GGCCTTGGGT
GCTATTGGTG GCGGTCCTGT GCGCGTTCTA GGTGTTGGCA AAGAGAGTAT TCAAGGGGAC
GTGGCCTTTG CTGACGCACT TGCGTTAATG GGTGCAAACA TTACTGCTGG TGAAGATTGG
ATTGAAGTTG CTGGCGTGAA AAATGCCAAT GGCAAACTGA ATGGCATCAC GATTGATTGC
ACAGAAATTC CAGATGCTGC AATGACGCTT GCAGTTGCCG CATTATTTGC AGAAGGTCCT
ACACGATTAA ACAGTATTGC TAGTTGGCGT GTAAAAGAAA CAGATCGTAT CGCAGCAATG
GCAAAAGAGC TCAAAAAAGT TGGCGCCAAT GTTGAAGAGG GCGCGGACTA TATCGTTGTG
CAAGCCCCCG TATTACAAAG CGATTGGAAG TCACCAAGTG AAGGTGTTGA TACTTACGAT
GACCATCGCA TGGCGATGTG CTTTTCGCTC GCTGCATTTG GCCTTAATGC ACTGAAGATC
AATGATCCAA ATTGCGTTGC AAAAACATTT CCGACTTACT TCGCTGAATT TGCGAAAGTG
GTCAATTAA
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| Protein sequence | MSGLPDIQIG PFKQAQGSIV LPGSKSISNR ALLLAALSTG TTTLKNLLDA DDTQVMRNAL
RQLGLSVINK ENKACIVEGC GGKLPVQEAD LFMGNAGTAI RPLTAALAMQ GGNYRLSGVA
RMRERPIRDL VDGLRQVGAK IGYELQEGYP PIKILAADIQ IKDVVKVRGD VSSQFLTALL
MALPLVANEP VRIEVIGELI SRPYIDITLK LMARFGVTVA CPDMQSFVIP AKTSGAVYKS
PGQLLVEGDA SSASYFLALG AIGGGPVRVL GVGKESIQGD VAFADALALM GANITAGEDW
IEVAGVKNAN GKLNGITIDC TEIPDAAMTL AVAALFAEGP TRLNSIASWR VKETDRIAAM
AKELKKVGAN VEEGADYIVV QAPVLQSDWK SPSEGVDTYD DHRMAMCFSL AAFGLNALKI
NDPNCVAKTF PTYFAEFAKV VN
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