Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1291 |
Symbol | |
ID | 6183216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1118054 |
End bp | 1119706 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671857 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001798030 |
Protein GI | 171463917 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0896483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.0414381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA TTTATGAACA AGGCTTGGAT CGCAATCCTG CTAACTACAC CCCAATTACT CCACTCTTAT TCTTAGAGCG TTCAGCGGAA ATTTATCCGA ATAAAACAGC CATTATTCAT GGCAAGTTAC GCCAGACCTG GAGTCAAACC TATGAGCGTT GCCGCCGCCT AGCGAGCGCT TTGCAAAAAC ACGGCATTGG CTTGGGTGAT ACGGTAGCTG TGATGCTGCC AAATACCCCT CCTATGGTAG AGGTGCACTT CGGAATTCCA ATGGCAGGCG CTGTATTAAA TGCTCTTAAT ACCCGCTTGG ATGCCGAATC TATAGCATTT ATGCTCAACC ATGGTGAGGC AAAAGTGGTT ATCGTGGATC CTGAGTTTTC GGTTGTTATG AAAAAGGCTC TTGAGATTGC AAAGAAAGAT TCAGGCCGTG AATTTTTGGT AATCGATGTA GGGGAAAAAG AGTTTGATGT TCCTGGTGAG AAGTTAGGCA AGTTGACTTA TGAACAGTTT CTTTCTGAGG GTGATCCTAG TTTTGCGTGG CAAGTTCCTG CAGATGAATG GCAAGCGATT TGCTTGAACT ACACCTCTGG TACAACTGGT AATCCTAAGG GAGTTGTGTA TCACCATCGT GGTGCCGCTA TTAATGCGGT GTCGAATGTC TTAGACTGGG ATATCAATAA GCACCCTGTG TACTTATGGA CATTACCGAT GTTCCACTGC AATGGCTGGT GTTTCCCATG GACGATTGCT GCTCGCGCCG GTGTAAATGT GTGTTTGCGT CGGGTTGATG CGCAGCATAT TTTTGCAGCT ATTAAAGAGC ATGGCGTAAC CCACTACTGC GCGGCTCCTA TTGTCCATAA CCTTTTGGTC AATGCGCCTG ATGAGCTAAA GGCTGGTGTT CCTACAGGCG TCAAAGGCTT GATTGCAGGT GCTGCGCCAC CTGCATCCAT TATTGAGGGT ATGGAAAAGC TAGGCTTCGA TTTAACTCAT GTTTATGGGT TAACTGAGGT TTATGGTCCT GCTTCTGTGT GCGTTAAGCA AGACGAGTGG AATGATTTGG ATATTGGCAA GCGCGCTCGT TTAAATGCTC GTCAAGGTGT ACGCTACCAC ATGCAACAAG CAATCGCAGT TTTGGATCCT GAGACGATGA AACCAGTTCC AGCTGATGGT GAAACCATGG GCGAAATTAT GTTCAAGGGC AACATCGCCA TGAAGGGTTA CCTGAAGAAC GAGAAGGCCA CTCAAGAAGC GTTTGAAGGT GGTTGGTTCC ACTCGGGCGA CTTAGCTGTG ATGAATCCCG ATGGCTATGT CAAGATGAAA GACCGCAGCA AAGATATCAT CATCTCTGGC GGGGAAAATA TTTCTTCTGT TGAGGTGGAG GATGTGCTGT ATCGCCATCC CGCAGTGAAC GCCGCTGCGG TTGTTGCCAA GCCTGATCCA AAGTGGGGTG AAACCCCTTG CGCCTTCCTG GAAATTAAGC CTGGTTCAGA CGTAACCCCA GAAGAAATCA TTGCCCATTG CAAGCAGCAT TTGGCTGGTT TTAAGGTGCC TAGGGCGATT GTGTTCTGTG AACTTCCTAA GACCTCAACT GGCAAGATTC AGAAGTTTGA GTTGCGCAAG CAGGCTGGAT CTGCCACCGC TATTGATGTC TAG
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Protein sequence | MANIYEQGLD RNPANYTPIT PLLFLERSAE IYPNKTAIIH GKLRQTWSQT YERCRRLASA LQKHGIGLGD TVAVMLPNTP PMVEVHFGIP MAGAVLNALN TRLDAESIAF MLNHGEAKVV IVDPEFSVVM KKALEIAKKD SGREFLVIDV GEKEFDVPGE KLGKLTYEQF LSEGDPSFAW QVPADEWQAI CLNYTSGTTG NPKGVVYHHR GAAINAVSNV LDWDINKHPV YLWTLPMFHC NGWCFPWTIA ARAGVNVCLR RVDAQHIFAA IKEHGVTHYC AAPIVHNLLV NAPDELKAGV PTGVKGLIAG AAPPASIIEG MEKLGFDLTH VYGLTEVYGP ASVCVKQDEW NDLDIGKRAR LNARQGVRYH MQQAIAVLDP ETMKPVPADG ETMGEIMFKG NIAMKGYLKN EKATQEAFEG GWFHSGDLAV MNPDGYVKMK DRSKDIIISG GENISSVEVE DVLYRHPAVN AAAVVAKPDP KWGETPCAFL EIKPGSDVTP EEIIAHCKQH LAGFKVPRAI VFCELPKTST GKIQKFELRK QAGSATAIDV
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