Gene Pnec_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1266 
Symbol 
ID6183365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1098729 
End bp1098998 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content50% 
IMG OID641671836 
Producthypothetical protein 
Protein accessionYP_001798009 
Protein GI171463896 
COG category 
COG ID 
TIGRFAM ID[TIGR03643] conserved hypothetical protein TIGR03643 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.212211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAAAT CTGGCCCTAA TGCTCTTGCA GAACCCGATT TATCTCGCCT GATTGAAATG 
GCCTGGGAGG ATCGCACGCC ATTTGACGCC ATTGAGAAAA GCTATGGCCT GGGTGAACCT
CAGGTTATCG TCATCATGCG TAGAGAGCTC AAGCGGAGCT CTTTTGAGCT CTGGCGCAAA
AGGGTAGCGG GAAGAGCAAC CAAACATGTT GCCTTGCGGG ATGATGATGT CACACGGGCT
TACTGCCCAA CACAATATAA AAGTAAATGA
 
Protein sequence
MSKSGPNALA EPDLSRLIEM AWEDRTPFDA IEKSYGLGEP QVIVIMRREL KRSSFELWRK 
RVAGRATKHV ALRDDDVTRA YCPTQYKSK