| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1100 |
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| Symbol | |
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| ID | 6183207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 960031 |
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| End bp | 960678 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671710 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001797887 |
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| Protein GI | 171463774 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGA AAAAATCAAT GCTTTCTAAA TTTCTAGGCT TTGGCCTGGG CGCATTCGTT
TGCCTATCTG TTTATGCTGC AGACCCTGTG GTCGAAGCAA ATGCGGATAC TGCCGTGCCC
AAGGAAAGTA TGTTCCAGGC GGGGCGTTCA TACATTGCCC GTGTTTCAGA TCGCTTGGCA
GACACTGTTA CAGGTAAATC AGAAGAGTTG ATTAATCGCG CCATGGAAGT TATTGGCGTA
CGTTACCGCT GGGATACAGA ATTGCCACAG TCCGGTTTGG ATGGCAGTAG CTTTGTGGGT
TACGTTTTCA AAGACAAGCT TGGATTTTTA TTGCCACGCA AATCTACTCA GATGAGCCGC
GTTGGCAAGC CAATTACGCG TGAAGAATTG CAGCCTGGCG ATCTCGTATT CTTCAACACC
ATGCGTTTAA CTTTTTCTCA CGTTGGTATT TATGTGGGCG ATAACAAATT TATTCACTCG
CCTTCTAAAG GTACGAATGT CAGAGTAGAT GATCTCGATA GCCTCTACTG GGACAAACGT
TTCGATGGTG CACGTCGTTT GGATGGCAGC GATAATCTCA ATGATTCAGA GCGTCAAGAA
CTTCTAAATG AAGTAAAAAA TCTCAAGCGT AAGTCGCGCA GTCTCTAA
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| Protein sequence | MSLKKSMLSK FLGFGLGAFV CLSVYAADPV VEANADTAVP KESMFQAGRS YIARVSDRLA
DTVTGKSEEL INRAMEVIGV RYRWDTELPQ SGLDGSSFVG YVFKDKLGFL LPRKSTQMSR
VGKPITREEL QPGDLVFFNT MRLTFSHVGI YVGDNKFIHS PSKGTNVRVD DLDSLYWDKR
FDGARRLDGS DNLNDSERQE LLNEVKNLKR KSRSL
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