| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1070 |
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| Symbol | |
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| ID | 6183391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 930549 |
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| End bp | 931403 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671682 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001797859 |
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| Protein GI | 171463746 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0810093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC AATCAGTCGG AGTAATCGGC GCAGGCGCTA TGGGAAACGG TATTGCACAA
GTGTGTGCAG TTGCCGGTCT TGATGTCGTC ATGGTTGATA TTAATGAGAC AGCAGTTCAA
CGTGGCCTCG AACAAATTGG CAAGAGCTTA GATCGTCTTG TCAAAAAAGA AACCTTAACA
ATTGAAGCAA AAGATGCTGC GCTCAAACGC GTTAAAGGCA GCACCTCCTA CAACGACTTT
AAAGGCTTAG GCTTAGTAAT TGAAGCTGCC ACCGAAAATC AAGCCATTAA AGAAAAGATT
CTTAAGCAAG TCGATGAGAT TGTGAGTAAA GACATCATCA TCGCCACCAA CACCTCCTCC
TTATCTATCA CCAAACTAGC TGCACTAGAC TCAAACCCGG CGCGCTTTAT AGGCATGCAC
TTCTTTAACC CGCCCCCTTT GATGGCTCTA GTAGAGGTAA TTCGAGGTCT ACAAACTAGT
GATGCTACCC ATGCTGCCAT TATTGAAATG GCTAAGCGTG TTGGCAAAGA ACCAATCACA
GTTAAAAACT CTCCAGGATT TGTCGTCAAT CGCATTTTGC TACCAATGAT TAATGAAGCC
TTTTTTGTAT TGTCTGAGGG TCTCGCAAGC CCCGAAGATA TTGACGCCAG CATGAAGCTA
GGGTGCAATC AACCGATAGG TCCGCTGGCA TTGGCCGATC TCATCGGCTT AGATACATGC
TTGGCAGTAA TGGAGGTCTA TTTTGAAAAC TTCAGTGACT CTAAATACCG CCCTTGCCCA
CTGCTTCGCG AAATGGTTGC AGCAGGATAT CTCGGCCGCA AAACTGGTCG CGGCGTCTAC
ACCTACGAAA AATAA
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| Protein sequence | MSIQSVGVIG AGAMGNGIAQ VCAVAGLDVV MVDINETAVQ RGLEQIGKSL DRLVKKETLT
IEAKDAALKR VKGSTSYNDF KGLGLVIEAA TENQAIKEKI LKQVDEIVSK DIIIATNTSS
LSITKLAALD SNPARFIGMH FFNPPPLMAL VEVIRGLQTS DATHAAIIEM AKRVGKEPIT
VKNSPGFVVN RILLPMINEA FFVLSEGLAS PEDIDASMKL GCNQPIGPLA LADLIGLDTC
LAVMEVYFEN FSDSKYRPCP LLREMVAAGY LGRKTGRGVY TYEK
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