Gene Pnec_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1066 
Symbol 
ID6184207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp927790 
End bp928164 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content43% 
IMG OID641671678 
Producthypothetical protein 
Protein accessionYP_001797855 
Protein GI171463742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.478298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0441936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA ATCTTCTCGC CATTAGCGTA GTGCTTGTAA GCCTTTTGGG CGCTGCAACC 
GCAAGCGCCA ATGAAGAAGT AGTTACATGG ACTTGTCAGG AAAGTAAGCA GTTCAAAACT 
GTTGGCTCTA CTGAAAAAGT TCGCTTAACT TGGGAATCTA AATCTTATGA TTTAGAGCGC 
CAAACTTCAT TGCCAGGTAG CTTACGCTAC AAGAATACCA ACTCCGGTTA CGATCTTGTA 
GTGTTAGGTA GCAAGGCAAT GTTGTTCAAC ATCAAAGCCG GTGTTCGTCT TGCTGATTTC 
TGCCAAACAG CAGAAATGAA GTCAGGTAAG TTGCCGCATT TGTTTGCTGG CGCGGAACCA 
TTTGTGCAGA ATTAA
 
Protein sequence
MKKNLLAISV VLVSLLGAAT ASANEEVVTW TCQESKQFKT VGSTEKVRLT WESKSYDLER 
QTSLPGSLRY KNTNSGYDLV VLGSKAMLFN IKAGVRLADF CQTAEMKSGK LPHLFAGAEP 
FVQN