Gene Pnec_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1033 
Symbol 
ID6184202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp900016 
End bp900654 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content42% 
IMG OID641671645 
Producthypothetical protein 
Protein accessionYP_001797822 
Protein GI171463709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA CATACATCAA AAAGCTCTTA ACTATTGCTG GATTAATTGT TGCGTCATCC 
ATGTTGCAAA ACGCAGCGTT AGCTCAACAA AAGAACGATC CAAAGTTTAA TAAGATGATG 
GCTGATAGTT TTAAGGCCGA GGGCATTGCA GGATTAGATC GCATTCAACA AGATGAAACT 
CAAAAGTTCT GTTCGGATCC AAAGTTTGCC AATAGCAAAC AAGGTGAAAA GATGCGGGAA 
AAGATCCAAA AAATCAACAT GGATTCTATT AAGCCACCGT CCGATGGAAA ATATATCGGT 
GATTGGAAGA GTGGCGAAAA GATTGCTCAA AGTGGTCGCG GAGCAACATG GACGGATAAG 
ACCGATACCG TTATTGGTGG TGGTTGTTAT AGCTGTCATC AGATTGATCC CAAAGAGATT 
TCCTATGGAA ATATCGGGCC TTCATTGACC GGCTACGGAA AAATGCGCGG TTATTCACCT 
GAGGTGGTTG CTTATACCTG GAATCGTATC AATAACTCCA AAGCATATAA CGCGTGCAGT 
AATATGCCGC GCTTTGCTCA CTTCAAACTC TTAAATGAGC AGCAGATACA GGATGTCATA 
GCATTGCTAC TTGATCCTGC CTCTCCAGTA AATCAATAA
 
Protein sequence
MKTTYIKKLL TIAGLIVASS MLQNAALAQQ KNDPKFNKMM ADSFKAEGIA GLDRIQQDET 
QKFCSDPKFA NSKQGEKMRE KIQKINMDSI KPPSDGKYIG DWKSGEKIAQ SGRGATWTDK 
TDTVIGGGCY SCHQIDPKEI SYGNIGPSLT GYGKMRGYSP EVVAYTWNRI NNSKAYNACS 
NMPRFAHFKL LNEQQIQDVI ALLLDPASPV NQ