| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1032 |
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| Symbol | |
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| ID | 6184108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 898249 |
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| End bp | 899979 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671644 |
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| Product | 5'-Nucleotidase domain protein |
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| Protein accession | YP_001797821 |
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| Protein GI | 171463708 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.556642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.811589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTAA GTCGCCGAGA ATTCTTACAG GCGTTGGCTA TTGCTTCTGC AGGCGGAATG
AGTCTGCAGT CTAATTTTGT TAATGCGCAG GGTAACGCGC AAAAATTTTA TGACTTACCA
AAATTCGGTA ATGTTCATTT CTTACATTTC ACTGACTGTC ATGCGCAGCT GCTGCCGATT
TACTTTCGTG AGCCCAATGT CAACCTAGGT ATTGGCGGGC AGGAGGGCAA GACTCCGCAT
TTGGTTGGCG AATATTTTTT AAAAGCAAAT GGTATTGGGC CGGGTACGCG TGATGCGCAC
GCTTTCACAT ATCTAGATTT TGTTGTAGCT GCTCAGAATT ACGGCAAGAT GGGCGGGTTT
GCTCATATGG CTACTTTGGT TAAGCAAATG AAAGCAAGTC GTCCAGGCGC CTTATTGCTG
GATGGTGGCG ATACTTGGCA AGGCTCGGGT ACGGCTCTCT GGACTAACGG CCAAGATATG
GTTGATGCCG CTCTTGCCTT GGGTGTTGAT GTGATGACGC CTCATTGGGA GATGACGCTT
GGAGAGAGGC GTGTGATGGA AATCGTGAAT GGCGATTTCA AAGGCAAAGT CAATTTTGTT
GCGCAAAATA TTAAAACGGC CGACTTTGGT GATTCTGTAT TTAATCCTTA TGTCATGAAA
GTGCAGAACG GTATTCAGGT TGCCATCATT GGTCAAGCCT TCCCATATAC CCCGATTGCC
AACCCTCGTT ACTTCACGCC AGATTGGACC TTTGGCATCC AAGAAGAAAA CCTCCAGAAG
ACAATTAATG AAGTGAAGTC AAAAGGGGCC AAGGTTGTGG TTCTGCTCTC TCATAATGGT
ATGGACGTAG ACTTGAAGAT GGCTTCTCGT GTAAGCGGTC TTGATGCCAT CATGGGTGGA
CATACGCACG ATGGCGTTCC TATTTCGGTC AAGGTTAAGA ACTCTGGTGG TGTAACTCTA
GTTACCAATG CTGGATCAAA TAGTAAGTTC TTGGGTGTAC TGGATTTCGA TGTGAAGGGC
GGTAAGGCAG TTGATTTCCG CTACAAGTTA TTCCCAATCT TCTCCAATAT GATTCCTGCA
GATCCAACGA TGAATAAGTT GATTGCAAAA ATCAGGGCGC CATTCGAGTC CAAGCTAAAT
GAAAAATTGG CCACAACTGA AGGCCTCTTG TATCGTCGGG GCAACTTCAA TGGCAGCTTT
GATCAGCTGA TCTTAGATGG TCTCATGGCG CAGAAGAATG CCGAGATTGC CTTCTCTCCA
GGTTTCCGTT GGGGAACCAG TCTTTTGCCG GGTCAAGCCA TTACTCGTGA AAATCTATTA
GATCAAACCG CAATTACTTA TCCATACACC ACGGTCACTA ACATGAGTGG TGAAACCATC
AAAACGATTC TTGAGGATAT AGCGGATAAC TTGTTTAACC CTGATCCGTA TTATCAGCAG
GGTGGAGATA TGGTGCGCGT TGGCGGAATG CAGTACACCA TTGATCCAGC TCAAACTGCA
GGTAAGCGTA TTACTGATAT GCGTTTGAAC GGCAAGCCAA TTGAGTCTAA TAAGACATAC
AAGGTAGCTG GATGGGCTCC GGTAAGCGAA GAGGCAAAGA ATGCGGGTGG AGAGCCAATC
TGGGATGTGA TTGAGCGCCA CTTACGGGAT GTCAAGATTG TCAAAGCGGT TAAGCTTAAT
GAGCCAATCA TTAAGGGTGT TTCCAACAAT CCGGGTATGG CTCCAATCTA A
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| Protein sequence | MSLSRREFLQ ALAIASAGGM SLQSNFVNAQ GNAQKFYDLP KFGNVHFLHF TDCHAQLLPI
YFREPNVNLG IGGQEGKTPH LVGEYFLKAN GIGPGTRDAH AFTYLDFVVA AQNYGKMGGF
AHMATLVKQM KASRPGALLL DGGDTWQGSG TALWTNGQDM VDAALALGVD VMTPHWEMTL
GERRVMEIVN GDFKGKVNFV AQNIKTADFG DSVFNPYVMK VQNGIQVAII GQAFPYTPIA
NPRYFTPDWT FGIQEENLQK TINEVKSKGA KVVVLLSHNG MDVDLKMASR VSGLDAIMGG
HTHDGVPISV KVKNSGGVTL VTNAGSNSKF LGVLDFDVKG GKAVDFRYKL FPIFSNMIPA
DPTMNKLIAK IRAPFESKLN EKLATTEGLL YRRGNFNGSF DQLILDGLMA QKNAEIAFSP
GFRWGTSLLP GQAITRENLL DQTAITYPYT TVTNMSGETI KTILEDIADN LFNPDPYYQQ
GGDMVRVGGM QYTIDPAQTA GKRITDMRLN GKPIESNKTY KVAGWAPVSE EAKNAGGEPI
WDVIERHLRD VKIVKAVKLN EPIIKGVSNN PGMAPI
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