| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1014 |
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| Symbol | |
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| ID | 6184073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 885151 |
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| End bp | 885852 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671632 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001797809 |
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| Protein GI | 171463696 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.233795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA CTTACCCATC GGCGGTTGAT GCCCTGCGGG ATATCTTAAA AGACGGACAA
AAATTAGCGG TTGGTGGTTT CGGCTTGTGC GGTATTCCGG AGGCTTTGAT TCAGGCCGTA
AAAGAATTGG GCGCTCAAAA TCTGACAGCA ATTGCGAATA ACGCAGGCGT GGATGGTTTT
GGTTTGGGCT TATTGCTCAA TTCCCGTCAA GCGAAAAAGA TGGTTGCATC CTATGTTGGT
GAAAACAAAG AATTCGAACG CCAGTTCTTG GCGGGTGAGT TGGAGTTGGA ATTTACGCCA
CAAGGCACCT TAGCTGAAAA ATTGCGCGCA GGTGGTTGCG GTATTCCTGC CTTCTATACC
AAGACGGGTG TTGGCACTTT AGTTGCCGAA GGTAAAGAAG TAAAAGAATT CGATGGCGAG
AAATACATCA TGGAGCGTTC AATCGTTTCT GATATTTCTT TGGTGAAAGC TTGGAAAGCG
GATAAGTCAG GAAATTTAGT CTATCGCTAT ACGGCGCGCA ACTTTAATCC TGTAGTAGCA
ATGGCAGGCA AGATCACAGT TGCTGAAGTG GAGGAGATTG TTGAAAACGG TCAATTACAT
CCAGATGAAA TTCATACGCC AGGCATTTAT GTTCACCGCT TGGTTATTAA TAAAACCCCT
GAGAAGCGCA TTGAACAGCG CACTTTGACT GCAAAAGCAT AA
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| Protein sequence | MNKTYPSAVD ALRDILKDGQ KLAVGGFGLC GIPEALIQAV KELGAQNLTA IANNAGVDGF
GLGLLLNSRQ AKKMVASYVG ENKEFERQFL AGELELEFTP QGTLAEKLRA GGCGIPAFYT
KTGVGTLVAE GKEVKEFDGE KYIMERSIVS DISLVKAWKA DKSGNLVYRY TARNFNPVVA
MAGKITVAEV EEIVENGQLH PDEIHTPGIY VHRLVINKTP EKRIEQRTLT AKA
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