| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1011 |
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| Symbol | |
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| ID | 6184106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 880498 |
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| End bp | 882534 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671629 |
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| Product | GTP diphosphokinase |
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| Protein accession | YP_001797806 |
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| Protein GI | 171463693 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.734245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATC TTCCTAGTAC CCCAGCTAAG TCGGCCACAA TCGTCGATGC TTGGTTTGCT
GAGCCGGCAG AGCTTCATGC GGCTGGTGTT TTGAAGATAT TATTGCAAAC ACTCAACCTA
GATGACGCAA CTCTTACAGC AGCGAGCAAT ATCGCTCGCA CGCATGGTAA AGAAGCGCTT
ATTAAGCTCA TCGGTGAGGA ACCGGCCAAG TTGCTGATTG GTTATCGCGG CTTGCGTCAG
GCTCAAGCAA AGCTAATGCG TGACGATGGC GGCTTAAGTG TTACTGGCCA AGAAGAGATG
TTGCGCAAAA TGCTTTTAGC ATTTGGTGAT GATTTGCGGG TAGTGCTGAT CTATCTTGCC
TCTCGCTTGC AGACTCTGCG TTGGATTACG CAGGAAAAGA TTAAGATGTC CGCAGCTTGG
GCGCAGGAAA TCCTCAATAT CGATGCCTCC TTAGCAAACC GTCTAGGCAT ATGGCAGATG
AAGTGGGAGA TGGAGGATTT GGCATTCAGA GCGCTCTCTC CGGATACCTA TCGTGAAATT
GCCAAGATGC TTGATGCAAA ACGCATAGAG CGCCAAGCAT TTATTGATCA AATTGTGTTG
CAGCTGCAAG GTGAATTAAA GCTCTCACAA ATTGAGGGTG AAGTTCTTGG GCGACCAAAG
CACATTTACA GCATTTGGAA AAAAATGCAA GGTAGGTCAT TGGATTTTGC TAATTTGTAT
GACGTCAGAG CATTTCGGGT GTTGGTGGAT GACATAAAGT CTTGTTATGC CGCGCTTGGC
ATCGTGCACA ACGTTTGGCA ACCAGTTTCA CGAGAGTTCG ACGATTACAT TGCAAGACCC
AAGCCCAACG GGTACCAATC GCTACATACG GTAGTCATGG ATGATGACGG CACTGCTTTT
GAAATTCAGG TGCGCACTCA TGAAATGCAT CAACAGGCTG AGTATGGTTT AGCGGCACAC
TGGCGCTACA AAGAGGGTGC ATATGTTGGT ATGGCGACGC CACCGAATCC GACAAAATCT
AATAAGCCCA GCATTAACCA TCAGCAGGGC ACACATAGCG CAGAGGTGGC CTATGAAAGA
CAGATCGCAT GGGCGCGTCA ACTGATCTCC TGGAAAGAGG ATGCTTGGGA GCAATTCAAG
CATCATGAGA TTGACGATCA TATTTATGTG CTCACACCAT TGGGTAAGGT GATCTCATTG
GAGAAGGGCT CAACGCCGAT TGATTTTGCC TATGCGGTTC ATACCAGTCT CGGCCATCGT
TGCAGGGGTG CGAGAGTGGA TAGTGCCATG GTGCCTCTAG AGACTTCTCT GCAAAATGGT
CAAACAGTCG AAATTATTGC GGTGAAGCAT GGTGGACCAT CGCGAGACTG GATCAGCCCT
GATAAAAATT ATCTGCGCTC ACAAAGAGCC TGCCAAAGAG TGCGCGCTTG GTTTAATGCA
TTAGATGATG AGGAGGCTGG CCATTCCAAT AAGGTTATTG ATAGCAAACA GGAAGTGAGC
CCAGAAATTA AAGCGGTTCC AATTGCGCCA GAAATCGTCT TGCGTAGTAG CACGCATAAA
TCAGGGCGAA GTGGCGATGT ATTGGTGGTG GGGGTTGATT CACTGCTTAC TCAATTAGCG
CGTTGCTGCA GACCTGTTCC TCCTGATGCG ATTGCGGGAT TTGTGACTCA GGGTAGAGGA
GTGTCGATTC ATCGACGTTC TTGCAAAACC TTTAGAGGTT TACTAGAGCG TGCGCCAGAG
CGGGTGATTC AAACAGCCTG GACAGCTTCA GTAGCAGACC CCATCATTAA CCGAGAGCAA
AAACGGGTAT TCCCGGCAGA TTTGCTAGTA ATGGGCTTGG ACCGACACGA GCTCATGCGG
GAGCTCTTTG AGATTCTGAC CAGGCAAGGC GTGCACGTTA TCGATCTGCG TAAATCGGCC
AAAAAAGGCT TGGCTCAGAT CCTTTTAACG GTTGAAGTGA AGGATTCTGA GGTGTTGCGT
GTCGTTCAAA ATAGCCTAGA AGAGGTCAAA GGGGTCACCC AAGTGCGCCG CCGGTGA
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| Protein sequence | MANLPSTPAK SATIVDAWFA EPAELHAAGV LKILLQTLNL DDATLTAASN IARTHGKEAL
IKLIGEEPAK LLIGYRGLRQ AQAKLMRDDG GLSVTGQEEM LRKMLLAFGD DLRVVLIYLA
SRLQTLRWIT QEKIKMSAAW AQEILNIDAS LANRLGIWQM KWEMEDLAFR ALSPDTYREI
AKMLDAKRIE RQAFIDQIVL QLQGELKLSQ IEGEVLGRPK HIYSIWKKMQ GRSLDFANLY
DVRAFRVLVD DIKSCYAALG IVHNVWQPVS REFDDYIARP KPNGYQSLHT VVMDDDGTAF
EIQVRTHEMH QQAEYGLAAH WRYKEGAYVG MATPPNPTKS NKPSINHQQG THSAEVAYER
QIAWARQLIS WKEDAWEQFK HHEIDDHIYV LTPLGKVISL EKGSTPIDFA YAVHTSLGHR
CRGARVDSAM VPLETSLQNG QTVEIIAVKH GGPSRDWISP DKNYLRSQRA CQRVRAWFNA
LDDEEAGHSN KVIDSKQEVS PEIKAVPIAP EIVLRSSTHK SGRSGDVLVV GVDSLLTQLA
RCCRPVPPDA IAGFVTQGRG VSIHRRSCKT FRGLLERAPE RVIQTAWTAS VADPIINREQ
KRVFPADLLV MGLDRHELMR ELFEILTRQG VHVIDLRKSA KKGLAQILLT VEVKDSEVLR
VVQNSLEEVK GVTQVRRR
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