| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0977 |
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| Symbol | |
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| ID | 6182904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 848043 |
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| End bp | 849359 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671597 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_001797776 |
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| Protein GI | 171463663 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTT CAAGGAAATC ACAGCAAAGT CCTAATCCAG GAAAACGAAT TGCGGTTGCC
TTTAGCGGCG GCCTCGATTC GGTTGTATTG CTCGATACGG TTTGCAAAGC GCATGCCAAA
AATTTATCCC AAAGTCAAAA CCAAATTTTC GCATTTCATA TTCATCATGG TTTGCAAAGG
TTGGCAGATG ATTGGCTTAT CTTTTGCGAG AAGTTAGCCA AAAAATACAA AATCCATTTT
GATTTTCGAC TACTGCACTT AGATAATTCT CAGGGGCTGG GTAATGTCGA ATCCAGAGCA
CGAGCAGGTC GTTACGAGGC ACTTTCCGAT CTTTGTGAAG AATATGGCAT TGAAGATCTG
CTCCTGGCGC ATCATCAAAA TGATCAGGCA GAGACGGTTC TGCTGCAGCT CCTGCGGGGC
TCTGGCGTTG CTGGTCTCGC AGGCATGCCG ATAAATAGGG ATATGCAGCG CCACAACCAC
CGCATTACCC TTTGGCGCCC ACTTTTAAAT CAAAGCAGGC AAGAGCTAGA GGCTTATGCC
AAGGAGCATA AGCTCAAGTG GATTGAAGAT CCAAGCAACC AAGATACAAA ATACCGTCGT
AATGCGCTGC GAAAAAAAGT CATCCCAGTT TTAGAAAAGA TTCAGCCAGA AGCATTGGTA
AATATCGCGC GTAGTGCTCA GTTGCTGGGT GAAGCGCAAT CATTGCTCAA CCGCTTAGCG
CAACAAGATG CGAAAGCCAT CATTTATCAT GATCAACTTA AGGCTGAGCC ATTGATTGCT
CTGGCTCAAA AAGATTTGCT GGCCGCAAAT AATGTCTTGC GCTATTGGTT GCAAACTCAG
CAACTGGCTA TGCCATCCCA AGAGCGCTTA AAGGCTTGGT GGCGAGATCT CGGTAAGAAG
ATAAAAGCTG ATACCAAGCT TGAGTGGCTT CATGACGAGA GAAGGATCTG CTTGTGGCGT
GGAATGCTTC AAGTGGGCAA TTTGGAGGAG GGTCGGTGGG TTTTAAAAGC ACTGCCACCT
AACTCGAAGC AATTGGGTTT TCCTGCTGAT TGGGTTAAAC ATGCCCAGGA AAATAACCAA
ATCAGCCTCA GAGATCGACG GGGATCCGAG AAGATTCAGA TTAAGCCTAA AACCCCCCGT
AAAACCCTCA AAAACCTCTT TCAGGAGGCT GATGTCCCGC CCTGGGAGCG TCAGGCACCC
TTGCTCTATA TCAATGATGA GTTGGTTGCT GTAGCGGGTA TTGGGCTTAG TTACCCACAT
CTGAGTGCCT CTGGTAGGCG AGTACTCCCA GAATGGGTGC AAAACTCTGT AAAATAA
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| Protein sequence | MASSRKSQQS PNPGKRIAVA FSGGLDSVVL LDTVCKAHAK NLSQSQNQIF AFHIHHGLQR
LADDWLIFCE KLAKKYKIHF DFRLLHLDNS QGLGNVESRA RAGRYEALSD LCEEYGIEDL
LLAHHQNDQA ETVLLQLLRG SGVAGLAGMP INRDMQRHNH RITLWRPLLN QSRQELEAYA
KEHKLKWIED PSNQDTKYRR NALRKKVIPV LEKIQPEALV NIARSAQLLG EAQSLLNRLA
QQDAKAIIYH DQLKAEPLIA LAQKDLLAAN NVLRYWLQTQ QLAMPSQERL KAWWRDLGKK
IKADTKLEWL HDERRICLWR GMLQVGNLEE GRWVLKALPP NSKQLGFPAD WVKHAQENNQ
ISLRDRRGSE KIQIKPKTPR KTLKNLFQEA DVPPWERQAP LLYINDELVA VAGIGLSYPH
LSASGRRVLP EWVQNSVK
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