| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0959 |
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| Symbol | |
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| ID | 6182909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 832561 |
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| End bp | 834237 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671581 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001797761 |
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| Protein GI | 171463648 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.336851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATC CCTCAAAACC CTGGTTAAAA AACTATCCTG AGGGCGTACC TCATGATGTG
GATATCTTTG AATATGACTC CTTGTTGGAT ATGTTCGAAC AATCCTTTGA GCGTTTTCCT
AATCGTCGAG CATGTGAGTA TTTGGGTAAA TTCTTAACTT ACCGTGAGCT TGATCAACAC
TCCAAACATT TTGCTGCCTA CTTACAAAAT CTAGGTTTAG AACCAGGGTC TCGTGTTGCT
ATCATGCTGC CAAATGTGAT GCAGTTTCAG ATTGCGATGC TGGGTATATT GCGAGCTGGG
TTTGTGGTGG TCAATGTCAA TCCCCTCTAT ACAGCCCGCG AGCTAGAACA CCAACTTAAG
GACGGTGGCG CTTCAGCATT AGTAATTCTA GAAAACTTTG CACATGTTTA TCAGCAAATT
GCAAAAAATG TTCCTTTGAA GAAAACCATT ATTACCTCTC TTGGGGAAAT GATTGGCCTT
AAGGGTGCAA TCGTTAACTT CGTTGTGCGA AATGTTAAAA AACTGGTTCC AGTATGGGAT
TTGCCTGGTC ATATTCTTTT TACTCAGGTT CTAAGCGAAG GTGGTCGACA TCAATGGCAG
AGGCCTAAGG TTTCCATGAG TGATATTGCC TTTTTGCAAT ATACCGGTGG TACAACAGGC
CTATCTAAGG GTGCAATCTT GCTTCATAAA AATATTTTGT CCAATGTCAT TCAAACTGAG
TTATGGCTTG AGCCTGGGCT CAAGCGCAAG AAAGTCGATC AGTTGGTATT TTTGTGCGCA
TTGCCGCTGT ATCACATCTT TGCCTTAACA GCTTGCGCTC TTGTTGGAAT GCGCAAGGGT
GGCTTGCTAG TCTTGGTGCC TAATCCACGT GATTTTGATG GGTTCATTAA GTTGCTGAAA
AAGCATCCGG ATATCAATAT CTTCCCCGGC GTGAATACTT TATTTAATGC CTTACTTCAC
AAGCCAGAAT TTGCCTCTGT GAAACTTCCC AATATCTTAG CCACTATAGG TGGCGGTATG
GCAATGCAAA AGGTTGTGGC CGATCAATGG CAGAAGGCGA CAGGTTCACC TATTGCTGAA
GGTTACGGTC TTTCAGAAAC CTCTCCAGTG GCCTGCGTTA ACTCTGCCTT AATTGAGAGC
TTTACTGGAT ATATTGGATT ACCAGTTCCA GGAACTGAGG TGGTTATTTT GGGTGATGAT
GGTATTGAAG TGCCTTTTGG TACGCCCGGT GAGATTTGCA TACGCGGCCC GCAAGTAATG
GCAGGTTATT GGAATAAGCC TGAAGAAACC AAAAATGTGA TGACGGCGGA TGGTTTTTTT
AAGTCAGGCG ATATCGGCAT CATGAATGCC GATGGATTTA CCAAAATTGT TGATCGTAAG
AAAGACATGG TTTTGGTTTC CGGATTTAAC GTTTATCCAA ATGAGGTAGA GGAAGTTCTC
TCTCTTATTC CGGGTGTTCT AGAGTGTGCC GTGATAGGGG TGCCGGATGA AGATTCTGGC
GAGGCAGTCA AGGCATTTAT CGTCAAACAA GATGAATCTT TAACAGAAGA AGATATTTTG
GCATTCTGTA AAGAAAATCT AACCAATTAC AAGTATCCAA AACATATCGC CTTCCGCAAT
GATTTACCTA AGACTAATGT TGGGAAAATA TTAAGACGTG AACTAAGGGA TTTATGA
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| Protein sequence | MVNPSKPWLK NYPEGVPHDV DIFEYDSLLD MFEQSFERFP NRRACEYLGK FLTYRELDQH
SKHFAAYLQN LGLEPGSRVA IMLPNVMQFQ IAMLGILRAG FVVVNVNPLY TARELEHQLK
DGGASALVIL ENFAHVYQQI AKNVPLKKTI ITSLGEMIGL KGAIVNFVVR NVKKLVPVWD
LPGHILFTQV LSEGGRHQWQ RPKVSMSDIA FLQYTGGTTG LSKGAILLHK NILSNVIQTE
LWLEPGLKRK KVDQLVFLCA LPLYHIFALT ACALVGMRKG GLLVLVPNPR DFDGFIKLLK
KHPDINIFPG VNTLFNALLH KPEFASVKLP NILATIGGGM AMQKVVADQW QKATGSPIAE
GYGLSETSPV ACVNSALIES FTGYIGLPVP GTEVVILGDD GIEVPFGTPG EICIRGPQVM
AGYWNKPEET KNVMTADGFF KSGDIGIMNA DGFTKIVDRK KDMVLVSGFN VYPNEVEEVL
SLIPGVLECA VIGVPDEDSG EAVKAFIVKQ DESLTEEDIL AFCKENLTNY KYPKHIAFRN
DLPKTNVGKI LRRELRDL
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