Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0933 |
Symbol | |
ID | 6184276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 810876 |
End bp | 811514 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671563 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001797745 |
Protein GI | 171463632 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAA AACTGAATAA TAGACCACTA TACGAAGATG TCGCAGACAG GCTTCGTGAA CAGATTTTTA GCAAACAATT ATCTCCAGGA AGCTGGTTGG ATGAACAATC CCTTGCTGAC CAATTTGGCA TCAGCCGCAC CCCTATGCGC GAAGCAATCA AGGTCTTAGC GTCCGAGGGG CTAGTGACTA TCAAAATGCG ACGCGGGGCT TATGTCACCG AAGTGGTTCG AAAGGATTTA GAACAAATCT TTACCATCCT CTCTCTCCTA GAGGGTCAAG CAGCTAAAGA GACTGCCAAT AAAGCAACTG AAGCCGAGTT AAACCTATTG GATCACCTGC ATCATCGCCT TGAAAAAGCA GCTGCGGATC GCGATATTGA GCAGTTTTTT GAGGTTAACG GGAAATTTCA TGAGTTAATT CAGGAAATTG CGGGCAATCG ATGGATGAAT GGCGTTATTG CTGATCTGCG TAAACTCTTG AAACTTCACC GCAGGGACTC ACTTACCAGC ACAGGCAGAC TGCAAAACTC TTTAGTGGAG CATCGGGAGA TACTGAGAGC CATTCTGAAA CGAGATGAAC ACGCTGCAGA ATTAGCTATG CACAAGCATC TAGAGAGAGG TCTTGAGGCT CTTCGTTAA
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Protein sequence | MNTKLNNRPL YEDVADRLRE QIFSKQLSPG SWLDEQSLAD QFGISRTPMR EAIKVLASEG LVTIKMRRGA YVTEVVRKDL EQIFTILSLL EGQAAKETAN KATEAELNLL DHLHHRLEKA AADRDIEQFF EVNGKFHELI QEIAGNRWMN GVIADLRKLL KLHRRDSLTS TGRLQNSLVE HREILRAILK RDEHAAELAM HKHLERGLEA LR
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