Gene Pnec_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0933 
Symbol 
ID6184276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp810876 
End bp811514 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID641671563 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001797745 
Protein GI171463632 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA AACTGAATAA TAGACCACTA TACGAAGATG TCGCAGACAG GCTTCGTGAA 
CAGATTTTTA GCAAACAATT ATCTCCAGGA AGCTGGTTGG ATGAACAATC CCTTGCTGAC
CAATTTGGCA TCAGCCGCAC CCCTATGCGC GAAGCAATCA AGGTCTTAGC GTCCGAGGGG
CTAGTGACTA TCAAAATGCG ACGCGGGGCT TATGTCACCG AAGTGGTTCG AAAGGATTTA
GAACAAATCT TTACCATCCT CTCTCTCCTA GAGGGTCAAG CAGCTAAAGA GACTGCCAAT
AAAGCAACTG AAGCCGAGTT AAACCTATTG GATCACCTGC ATCATCGCCT TGAAAAAGCA
GCTGCGGATC GCGATATTGA GCAGTTTTTT GAGGTTAACG GGAAATTTCA TGAGTTAATT
CAGGAAATTG CGGGCAATCG ATGGATGAAT GGCGTTATTG CTGATCTGCG TAAACTCTTG
AAACTTCACC GCAGGGACTC ACTTACCAGC ACAGGCAGAC TGCAAAACTC TTTAGTGGAG
CATCGGGAGA TACTGAGAGC CATTCTGAAA CGAGATGAAC ACGCTGCAGA ATTAGCTATG
CACAAGCATC TAGAGAGAGG TCTTGAGGCT CTTCGTTAA
 
Protein sequence
MNTKLNNRPL YEDVADRLRE QIFSKQLSPG SWLDEQSLAD QFGISRTPMR EAIKVLASEG 
LVTIKMRRGA YVTEVVRKDL EQIFTILSLL EGQAAKETAN KATEAELNLL DHLHHRLEKA
AADRDIEQFF EVNGKFHELI QEIAGNRWMN GVIADLRKLL KLHRRDSLTS TGRLQNSLVE
HREILRAILK RDEHAAELAM HKHLERGLEA LR