Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0916 |
Symbol | |
ID | 6184232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 793203 |
End bp | 793763 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641671546 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_001797728 |
Protein GI | 171463615 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.632682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACCC GCGCTAAACG AGCTGGCGAA GATCGGCTCA TCAAGAAGTA CCCCAATCGT CGTCTCTACG ACACTCAGAC AAGTACCTAT GTCACATTGT CAGATATCAA AAATTTGGTT ATGACAGGTG AAGTATTCAA GGTGGTAGAC GCTAAAACTG AAGAAGATTT AACACGCAAT ATCTTGTTGC AAATTATTCT TGAAGAAGAG GCTGGTGGTG CTCCAGTTTT CTCCACGCAA ATGCTTTCCC AAATCATTCG CTTCTATGGA AACTCCATGC AAGGCTTAAT GGGAAACTAT CTTGAAAAAA CCATGCAGTC ATTTGTGGAT ATCCACAATA AGCTTGGCGA TCAAACCAAA GGTTTGGGTG CTGGAAGCAT GCCTGAAGCT TGGTCTCAGA TGATGAATTT GCAAAATCCA CTCATGCAAG GCTTGATGGG AAGCTATATG GAGCAGAGCA AAGATTTATT TATCAAAATG CAAGAACAAG TGCAGGGTTC ACAAAATATT TTTGGAAACT TCCCATTTAC TCAACAGCCC AGCAAAACTG AAAAAGAGTA G
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Protein sequence | MVTRAKRAGE DRLIKKYPNR RLYDTQTSTY VTLSDIKNLV MTGEVFKVVD AKTEEDLTRN ILLQIILEEE AGGAPVFSTQ MLSQIIRFYG NSMQGLMGNY LEKTMQSFVD IHNKLGDQTK GLGAGSMPEA WSQMMNLQNP LMQGLMGSYM EQSKDLFIKM QEQVQGSQNI FGNFPFTQQP SKTEKE
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