| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0908 |
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| Symbol | |
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| ID | 6183118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 782584 |
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| End bp | 783213 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671537 |
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| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
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| Protein accession | YP_001797720 |
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| Protein GI | 171463607 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTACA ACCATTCTCA GTCTGAAAAT CTGGAACCAA AGGGCTTGGG CTTGGTTCCA
ATGGTGATTG AAACCTCTGG TAGGGGTGAA CGCGCTTACG ACATCTATTC CAGATTGTTG
CGTGAGCGGG TTATTTTCTT AGTTGGCGAA GTAAACGATC AAACTGCAAA CTTAGTTATT
GCTCAACTAT TATTTCTTGA GAGTGAAAAT CCAGATAAAG AGATTTCTCT GTACATTAAC
TCTCCTGGTG GAGCTGTTTC AGCGGGTCTG GCTATTTACG ACACAATGCA ATTCATCAAG
CCCCATGTAA GTACTTTATG CATGGGTATG GCTGCCAGTA TGGGGGCCTT TCTATTGTGC
GCTGGTGAAA ATGGCAAGCG CTATGCGCTG CCAAATTCAC GCGTCATGAT TCATCAGCCT
TTAGGCGGTG CTCGTGGTCA GGCATCGGAT ATTGAGATTC AAGCACGTGA GATTTTGTAT
TTACGTGAAC GATTAAATAA AATTTTGGCC GATCGCACTG GTCAATCCAT TGAAACAATT
GCAAAAGATA CTGATCGCGA CAACTTTATG TCGGCTGAAC AAGCCCGTGA TTATGGTTTG
ATCGACAAGG TTATCGAGAA GCGCCCTTAA
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| Protein sequence | MIYNHSQSEN LEPKGLGLVP MVIETSGRGE RAYDIYSRLL RERVIFLVGE VNDQTANLVI
AQLLFLESEN PDKEISLYIN SPGGAVSAGL AIYDTMQFIK PHVSTLCMGM AASMGAFLLC
AGENGKRYAL PNSRVMIHQP LGGARGQASD IEIQAREILY LRERLNKILA DRTGQSIETI
AKDTDRDNFM SAEQARDYGL IDKVIEKRP
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