| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0907 |
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| Symbol | clpX |
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| ID | 6184066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 781192 |
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| End bp | 782553 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671536 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001797719 |
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| Protein GI | 171463606 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGATA CCAACAATAC TAATTCATCA GATAAGGTTC TGTTTTGCTC TTTCTGTGGC
AAGAGTCAGT ATGAAGTTAA AAAGTTAATT GCTAGCCCGT CTGTATTTAT TTGTGATGAA
TGCATAGACT TATGCACCGA CATCATTCAA GAAGAAATTA ACAAGCTTCC CAGGGAGGAT
AGCGATGATT CATTGCCTAC ACCACATCAA ATTCGCAAGA ATTTAGATCA GTACGTCATT
GGTCAAGACC ATGCCAAGAA AACTTTGGCG GTTGCTGTTT ATAACCATTA CAAGCGCTTG
CAATATTTGC CTAAGCCCAA AAAAGAGAAA TTAGATAAAG ATGGCAAGCC GGTAGAGGGT
TCAGATAAAA AAGAATCTAA GCTACCTGCT AAGGCGATGG TCGATGACGT TGAGTTGGCC
AAAAGCAATA TTTTATTAAT TGGACCAACA GGATCAGGTA AAACCTTGCT CGCGCAGACG
TTAGCGCGCA TGTTGGACGT ACCATTTGTA ATGGCTGATG CAACCACCTT AACAGAGGCG
GGCTATGTTG GCGAAGATGT AGAAAACATT ATTCAGAAAC TATTGCAAGC ATGTGACTAC
AACGTCGAAA AAGCACAGCG CGGTATTGTT TACATCGATG AGATCGATAA GATTTCCCGT
AAGTCAGACA ACCCATCAAT TACACGTGAT GTATCTGGTG AGGGCGTTCA GCAGGCGCTA
TTAAAGCTGG TTGAAGGTAC GATGGCTTCT GTGCCTCCCC AGGGTGGCCG TAAACATCCC
AATCAAGACT TTTTGCAAGT CGATACAACC AATATCTTGT TTATTTGCGG TGGCGCTTTT
GATGGTCTTG AAAAAGTTAT TCAACAGCGT ACAGCTAAAA CAGGTATCGG CTTTAATGCA
ACCGTCCCAG GCAAAGATGA TCGTGGTGTT AGCGACCTCT TAATTGAGGT GGAGCCAGAA
GATTTGATCA AGTTTGGATT GATTCCTGAG TTGATTGGAC GCTTGCCAGT TGTGGCTACT
TTGGCCCAAT TGGATGAAGA GGCATTGATC CAGATTCTGA CAGAGCCTAA AAATGCCTTG
GTTAAACAAT ATCAAGCACT TCTCACCATG GAAGGCTCTG AGCTAGAAGT ACGCCGTGAA
GCTCTATCAG CTATAGCTAA AAAGGCGATT GCCCGTAAAA CAGGCGCTCG GGGCCTTAGA
TCGATCCTTG AAGGCTCGTT GATGGATGTG ATGTATGACT TGCCATCTCT GAAGAATGTT
CAAAAAGTCA TTATCGACGA AAGTAGCATC GCCGATGGCG GAAAACCACT TTTGGTTTAC
AAGCAGAAAG TAGATCATGC AGATTTGAGC AAAAAAGCCT AA
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| Protein sequence | MSDTNNTNSS DKVLFCSFCG KSQYEVKKLI ASPSVFICDE CIDLCTDIIQ EEINKLPRED
SDDSLPTPHQ IRKNLDQYVI GQDHAKKTLA VAVYNHYKRL QYLPKPKKEK LDKDGKPVEG
SDKKESKLPA KAMVDDVELA KSNILLIGPT GSGKTLLAQT LARMLDVPFV MADATTLTEA
GYVGEDVENI IQKLLQACDY NVEKAQRGIV YIDEIDKISR KSDNPSITRD VSGEGVQQAL
LKLVEGTMAS VPPQGGRKHP NQDFLQVDTT NILFICGGAF DGLEKVIQQR TAKTGIGFNA
TVPGKDDRGV SDLLIEVEPE DLIKFGLIPE LIGRLPVVAT LAQLDEEALI QILTEPKNAL
VKQYQALLTM EGSELEVRRE ALSAIAKKAI ARKTGARGLR SILEGSLMDV MYDLPSLKNV
QKVIIDESSI ADGGKPLLVY KQKVDHADLS KKA
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