| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0906 |
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| Symbol | |
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| ID | 6182982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 778567 |
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| End bp | 780999 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671535 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001797718 |
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| Protein GI | 171463605 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGCC ACTTATTACC ACCCTCTGAA CCCATTCAAC TACCTTTACT CCCATTAAGG
GATGTAGTTG TATTTCCTCA TATGGTGATC CCATTGTTTG TGGGTCGTCC TAAATCGATT
AAGGCTCTTG AAGCTGCAAT GGAAACAGGC AAAAACGTAC TATTAGTAGC CCAAAAAACG
GCTGCTAAAG ATGAGCCTGT GATAGAAGAT CTCTATGAAG TTGGTTGCAT TGCAAATATC
TTGCAGATGC TTAAGCTTCC GGACGGCACC GTAAAGGTTT TGGTTGGAGG CGTTCAACGT
GCTGAAGTGA GTCAAATTGA AGATAGTCTT GGCTACTTCA ATTGCGAAGC AACGCCTACC
GCCATCAATG CAATCGATGC TCACGAAACG GAAGCATTGC GCCGTGCAAT CATGGCACAG
TTTGATCAAT ATGTAAAACT AAACAAAAAA GTACCCCAAG AAATTCTGTC GTCTTTGGGC
AGCATAGATG ATCCGAGTCG CTTAGCCGAT ACCATCTGCG CCCATTTACC TGTGAAGCTG
GAGCAAAAGC AGCGCCTGCT CGAAATGACG GACGTAGTTC AGCGCCTTGA GAACTTGCTT
ACTGATCTTG AAAGTGAGAT TGATATCTTG CAAGTAGAAA AGCGCATTCG TGGCCGTGTG
AAGCGTCAGA TGGAAAAGAG TCAGCGCGAG TACTATTTGA ATGAACAAGT AAAAGCTATT
CAAAAGGAAT TGGGCGAAGG TGAAGAGGGT GCTGATCTAG AGGAGTTGGA GAAGCGCATC
AAAGCTGCGC GTATGCCTAA AGAAGCATTA AAAAAAGCAG AGTCTGAACT TAAGAAACTT
AAGCTGATGT CATCGATGTC TGCAGAGGCA ACCGTTATAC GCAACTTTAT TGACACATTG
GTCAATCTTC CGTGGAAGAA AAAAACCAAG ATTAATAGTG ATCTCACTAA TGCTGAAAAA
GTATTAGATG AAGACCACTA TGGTTTAGAT AAGGTTAAAG AGCGAATCTT GGAGTATCTC
GCAGTCCAAC AGCGTGTTGA TCGCGTGAAA GCTCCTATTC TTTGTTTAGT TGGTCCCCCT
GGTGTCGGTA AGACATCTCT GGGGCAGTCT ATTGCCCGCG CAACGAATCG GAAGTTTGTG
CGTATGGCCC TAGGTGGCGT TCGCGATGAG TCTGAGATTC GTGGTCATCG TCGTACCTAT
ATCGGCTCAA TGCCCGGCAA GATCTTGACT AGCCTTACTA AGGTTGGCGT TCGCAATCCC
CTGTTCCTCT TAGATGAAGT GGATAAGATG GGCATGGATT TCCGCGGAGA CCCAGCTAGC
GCTTTATTGG AGGTATTAGA TCCTGAACAA AACCATACAT TCCAAGATCA CTATGTTGAA
GTGGATTTTG ATTTGTCAGA CGTGATGTTC GTGGCAACCT CAAATTCTTT AAATATCCCC
GGTCCACTTT TAGACCGTCT TGAGATTATT CGTTTGGCTG GTTATACGGA AGATGAAAAA
ACGAGCATTG CTGTGAATTA TTTGATTCCT AAACAAATCA AAAATAATGG CCTGAAAAAA
GACGAGCTCA AGATTGAAGA TAGCGCTGTA CGTAACATGA TTCGGTATTA CACACGCGAA
GCCGGTGTCC GTTCTTTAGA GCGTGAAATT AGCAAGATTT GCCGTAAGGT AGTTAAGCTT
TTGCTCTTGA AGAAAGAGTC TGCGCCTGTT ATTGTGAATG TAGACAACCT TGAGAAGTTC
CTATCCGTGC GCATGTATGA CTTTGGATTA GCGGGCAAGG AAAACAAAGT TGGGCAAGTA
ACCGGTTTGG CATGGACTGA GGTTGGAGGT GATTTGCTGA CGATTGAAGC GGCAGTCATG
CCAGGTAAAG GTGCAATTAC TCGTACAGGA TCTATCGGCG ATGTGATGAA GGAGTCGGTT
GAGGCGGCTC GCACAGTGGT TCGCTCACGA GCAAGACGTC TTGATATTGC TGATGATTTA
TTTGAGAAAA AGGATATTCA TATCCACTTC CCAGATGGCG CAACACCTAA AGATGGCCCA
TCAGCTGGCA TTGCTATTAC TACAGCGTTA GTCTCGGTAT TTACTGACAT ACCAATTCGT
TCTGACGTAG CCATGACGGG TGAAATTACA CTGCGCGGTG AAGTGCTTCC AATTGGCGGT
TTAAAAGAAA AGCTATTGGC AGCTCATCGA GGTGGTATTA AATTGGCTCT GATTCCGGAA
GAGAATGTGA AGGATCTCAT TGATATTCCA GATAATGTCA AAAATGCCAT TGAAATCATT
CCTGTCCGTT GGATTGATAA GGTGCTTGAA TTGGCTTTGG AGCGTATGCC AGTTTCATTG
CCTGAACCAA CCCCTGAAGA GTTAGCAAAA AAAGCCGCTG AAGCCAGCAA GGTCGGTGAC
AAAGGCGCTA CTTCAGAGGT TCTTAAACAC TGA
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| Protein sequence | MPGHLLPPSE PIQLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMETG KNVLLVAQKT
AAKDEPVIED LYEVGCIANI LQMLKLPDGT VKVLVGGVQR AEVSQIEDSL GYFNCEATPT
AINAIDAHET EALRRAIMAQ FDQYVKLNKK VPQEILSSLG SIDDPSRLAD TICAHLPVKL
EQKQRLLEMT DVVQRLENLL TDLESEIDIL QVEKRIRGRV KRQMEKSQRE YYLNEQVKAI
QKELGEGEEG ADLEELEKRI KAARMPKEAL KKAESELKKL KLMSSMSAEA TVIRNFIDTL
VNLPWKKKTK INSDLTNAEK VLDEDHYGLD KVKERILEYL AVQQRVDRVK APILCLVGPP
GVGKTSLGQS IARATNRKFV RMALGGVRDE SEIRGHRRTY IGSMPGKILT SLTKVGVRNP
LFLLDEVDKM GMDFRGDPAS ALLEVLDPEQ NHTFQDHYVE VDFDLSDVMF VATSNSLNIP
GPLLDRLEII RLAGYTEDEK TSIAVNYLIP KQIKNNGLKK DELKIEDSAV RNMIRYYTRE
AGVRSLEREI SKICRKVVKL LLLKKESAPV IVNVDNLEKF LSVRMYDFGL AGKENKVGQV
TGLAWTEVGG DLLTIEAAVM PGKGAITRTG SIGDVMKESV EAARTVVRSR ARRLDIADDL
FEKKDIHIHF PDGATPKDGP SAGIAITTAL VSVFTDIPIR SDVAMTGEIT LRGEVLPIGG
LKEKLLAAHR GGIKLALIPE ENVKDLIDIP DNVKNAIEII PVRWIDKVLE LALERMPVSL
PEPTPEELAK KAAEASKVGD KGATSEVLKH
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