Gene Pnec_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0888 
Symbol 
ID6184510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp758469 
End bp758666 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content40% 
IMG OID641671514 
Producthypothetical protein 
Protein accessionYP_001797701 
Protein GI171463588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.201021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGCG CTTTTCACTC CCCTGAATTT ACCTCCCTGC GAATTATTAT TGCCGCCTTA 
CTGCTGTCTA TAGTTGGGCA TCTAATTTTA TTTTTTGGTC TACCTTTTGT CTCATTTAAC 
GATGTACACT CAATTCCTGA AGATCTCATT ATTAGGACCG AGCTAAAAAC AGAGCCGCCC 
AAAAAAAAAT CCAAATGA
 
Protein sequence
MGSAFHSPEF TSLRIIIAAL LLSIVGHLIL FFGLPFVSFN DVHSIPEDLI IRTELKTEPP 
KKKSK