Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0883 |
Symbol | |
ID | 6184410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 755349 |
End bp | 755984 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671509 |
Product | dTMP kinase |
Protein accession | YP_001797696 |
Protein GI | 171463583 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAC ATACAGGATA TTTCATCAGC TTTGAAGGCA TTGATGGAGC AGGAAAGAGC ACTCATATCG ATGCATTTCG CAATCTGATA CAAGAACGCT ACCCAAATAT AGAGGTAGTA ATGACTCGTG AGCCGGGGGG TACGGTCCTA GGCGAGCAAT TGCGAAACTT GCTTCTCGAT ACCCCTATGA ATCTTGAGAC TGAAGCCTTG CTCATGTTCG CCGCACGTCG CGAGCATCTG TCTCAGGTTA TCAAACCGGC ACTTACGGCT GGCAAAATTA TCATTTCCGA TCGCTTTACC GATGCCAGCT TTGCCTACCA GGGCGGTGGA CGTGGTTTGA GCTTAGCCAA GTTAAACGAT TTGGAACGCT GGGTGCAGGG CCAACCGGAT GGCTCCATTT TGCAGCCGAA CTTAACCATC TTGTTTGACC TACCCGGTGA TATTGCAGAG GCGCGACGCT CTAAAGTACA TACACCGGAC AAATTTGAAA AGATGGACTT ATCTTTTTTC GAGAGAGTTC GTCAAGAATA CTTGCGCCGA GCCAAGGATG ATCCCGACCG CTTTCATCTA GTCGATGCAA CCCAAACTCC TGAAGCTATA TGGAATGGCT TGAAGTTGAT TCAGATTGAT CTATAA
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Protein sequence | MTSHTGYFIS FEGIDGAGKS THIDAFRNLI QERYPNIEVV MTREPGGTVL GEQLRNLLLD TPMNLETEAL LMFAARREHL SQVIKPALTA GKIIISDRFT DASFAYQGGG RGLSLAKLND LERWVQGQPD GSILQPNLTI LFDLPGDIAE ARRSKVHTPD KFEKMDLSFF ERVRQEYLRR AKDDPDRFHL VDATQTPEAI WNGLKLIQID L
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