Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0870 |
Symbol | |
ID | 6184144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 745944 |
End bp | 746399 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641671496 |
Product | CBS domain containing protein |
Protein accession | YP_001797683 |
Protein GI | 171463570 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.258061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.509671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTC GTGACATATT GCGCGTTAAA GGGAGCACCC TTTTTACAGT AGCGCCAGAT ACAGCTCTTC AAACTGCAGT CTTAGTGATG AGCGAGCATG ACATAGGTTC TTTGGTTGTA ATGGAATATG ACAAGCTTGT TGGAATTCTG ACTTTTCGTG AAATCATTTC CGCTTTAGCT AAGCATCATG GCAAGCTAGA GGGTTTGACG ATTAATTCTG TCATGAATCA AAAGCCTTTG ACATGCAACA TGGAAACCGA GATTGATGAG GTACGTCGCA TGATGTTGGT TGATCATGCA CGCTATTTAC CAGTGGTAGA CCAAAAGATG TTGATGGGTG TTATTTCTTT CTATGACGTT GCTAAATCGG TTGTGGAAGC CCAGGACTTT GAAAACACCA TGCTCAAGGC CTATATCCAC GACTGGCCAG AAGATACCGA AAAAGCAGCA TCCTAA
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Protein sequence | MKVRDILRVK GSTLFTVAPD TALQTAVLVM SEHDIGSLVV MEYDKLVGIL TFREIISALA KHHGKLEGLT INSVMNQKPL TCNMETEIDE VRRMMLVDHA RYLPVVDQKM LMGVISFYDV AKSVVEAQDF ENTMLKAYIH DWPEDTEKAA S
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