Gene Pnec_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0870 
Symbol 
ID6184144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp745944 
End bp746399 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID641671496 
ProductCBS domain containing protein 
Protein accessionYP_001797683 
Protein GI171463570 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.258061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.509671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC GTGACATATT GCGCGTTAAA GGGAGCACCC TTTTTACAGT AGCGCCAGAT 
ACAGCTCTTC AAACTGCAGT CTTAGTGATG AGCGAGCATG ACATAGGTTC TTTGGTTGTA
ATGGAATATG ACAAGCTTGT TGGAATTCTG ACTTTTCGTG AAATCATTTC CGCTTTAGCT
AAGCATCATG GCAAGCTAGA GGGTTTGACG ATTAATTCTG TCATGAATCA AAAGCCTTTG
ACATGCAACA TGGAAACCGA GATTGATGAG GTACGTCGCA TGATGTTGGT TGATCATGCA
CGCTATTTAC CAGTGGTAGA CCAAAAGATG TTGATGGGTG TTATTTCTTT CTATGACGTT
GCTAAATCGG TTGTGGAAGC CCAGGACTTT GAAAACACCA TGCTCAAGGC CTATATCCAC
GACTGGCCAG AAGATACCGA AAAAGCAGCA TCCTAA
 
Protein sequence
MKVRDILRVK GSTLFTVAPD TALQTAVLVM SEHDIGSLVV MEYDKLVGIL TFREIISALA 
KHHGKLEGLT INSVMNQKPL TCNMETEIDE VRRMMLVDHA RYLPVVDQKM LMGVISFYDV
AKSVVEAQDF ENTMLKAYIH DWPEDTEKAA S