Gene Pnec_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0841 
SymbolrnhA 
ID6183191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp723840 
End bp724304 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID641671470 
Productribonuclease H 
Protein accessionYP_001797659 
Protein GI171463546 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCATA CCAAATCCTC TCATCACCAA CCACATATCG TGATTTATAC CGATGGCGCC 
TGCAAGGGCA ATCCAGGCCC AGGAGGCTGG GGGGCTGTAT TACGCTCTGG AGGTCACGAG
AAACATATTC ATGGCGGAGA AAAGCTGACA ACTAACAACC GCATGGAAAT TTGTGCGGTA
ATTTTTGCCT TAAAGGCCTT AAAGCAGAGC AGCACTGTGG AGCTATGGAC AGATTCTCAA
TATGTTCAAA AAGGTGTGAC TGAATGGCTT GAGGGCTGGA AGAAAAGGGG TTGGAAAACC
GCCAGCAAGG ATCCGGTTAA AAATGCCGAT CTTTGGCAGG AACTTGATAC TCTAATTCCA
GATCACGACA TCTCTTGGCA CTGGGTTAGA GGTCATGACG GACACCCTGG GAATGAATTA
GCAGATCAGC TAGCCAATAA GGGTGTGGAA GAGTTTTTAC CCTAG
 
Protein sequence
MLHTKSSHHQ PHIVIYTDGA CKGNPGPGGW GAVLRSGGHE KHIHGGEKLT TNNRMEICAV 
IFALKALKQS STVELWTDSQ YVQKGVTEWL EGWKKRGWKT ASKDPVKNAD LWQELDTLIP
DHDISWHWVR GHDGHPGNEL ADQLANKGVE EFLP