Gene Pnec_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0836 
Symbol 
ID6183730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp721874 
End bp722146 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content48% 
IMG OID641671465 
Productprotein of unknown function DUF1178 
Protein accessionYP_001797654 
Protein GI171463541 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT ACAATTTAGC TTGCCCTCTG GATCATCGCT CTGAAGGTTG GTTTGCCTCT 
GAGGACGATT GCCTTGCTCA GCAGGATAAG GGGATTCTTG CTTGTCCAGT ATGCGACAGT
ACGGAAATCT CTCGCATGCC TTCTGCCCCC CATATTGCTA AATCATCTTC AACTGATTTG
GTTTCTGCAT CCAAGGCTGA ATCTGAAAAT CTCAGTGGCG GTGTTGTGGC GTTGACTGGA
AACGACCACT CTCAGCTTGA AGTGCAAGTC TAA
 
Protein sequence
MKVYNLACPL DHRSEGWFAS EDDCLAQQDK GILACPVCDS TEISRMPSAP HIAKSSSTDL 
VSASKAESEN LSGGVVALTG NDHSQLEVQV