Gene Pnec_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0835 
Symbol 
ID6182977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp721209 
End bp721808 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content42% 
IMG OID641671464 
ProductNUDIX hydrolase 
Protein accessionYP_001797653 
Protein GI171463540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.773833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.937872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA AATCATTTAA AGATTTGCCG ATAGGGGATG TCCATTTACG CGAAGAGCGC 
ATTTCCGGCG AAGACATCTA TGGTGAAATT TTCCTTAAGA TGAAACGCGA TAAAGTTTCT 
TTGCCAGACG GGGAGGAGGC CATTCGTGAA TATTTGACTC ATCCTGGAGC GGTTGCCATA 
CTTGCAATCT TAGAGGATGG AAGGGTGCTT CTTGAACGTC AATATCGCTA TCCAATTGCA 
AAGGCTTGTA TTGAAATTCC TGCTGGCAAA CTTGAGATAG GTGAAGATCA TCTTTTATGT 
GCAAAACGAG AGCTCGAAGA AGAGACTGGC TACACTGCAA AAAAATGGAG CTACATTCGC 
CGCATTCATC CGTTAATTTC ATATTCAACT GAACTCATTG ATATTTATCT TGCTGAAGGA 
TTGGTGCCCG GAAAAAGTCA TCTGGATGAT GAGGAGTTTT TAGATGTTTT TGCAGCCTCA 
TTGGAGCAAT TACTGGCCTG GGTTGAAGAT GGAGAGATTA CAGATGTCAA AACAACGATT 
TCTGCCTATT GGCTAGACCG TTACCGTAGG GGTTTAGTTA AGCCAACCCC AATCAAATAG
 
Protein sequence
MAEKSFKDLP IGDVHLREER ISGEDIYGEI FLKMKRDKVS LPDGEEAIRE YLTHPGAVAI 
LAILEDGRVL LERQYRYPIA KACIEIPAGK LEIGEDHLLC AKRELEEETG YTAKKWSYIR 
RIHPLISYST ELIDIYLAEG LVPGKSHLDD EEFLDVFAAS LEQLLAWVED GEITDVKTTI 
SAYWLDRYRR GLVKPTPIK