Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0824 |
Symbol | |
ID | 6184362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 708049 |
End bp | 709302 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641671453 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_001797642 |
Protein GI | 171463529 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAA TCAAGAACTA CACCCTCAAT TTTGGTCCCC AGCATCCTGC TGCACACGGC GTATTGCGCT TAGTACTCGA GCTTGACGGT GAGGTGATCC AACGCGCTGA TCCACATATT GGTTTATTGC ATCGCGCCAC TGAAAAGCTA GCTAAAACTC GTACGTGGAT TCAAAACATT CCTTACATGG ATCGCTTGGA TTATGTTTCG ATGATGTCCA ATGAACATGC CTATGTCATG GCCATTGAAA AGTTGTTGCA AGTGGATGTT CCTTTGCGCG CTCAGTACAT TCGTGTGATG TATGATGAGC TAACTCGCTT ATTGAACCAC TTGCTTTGGA TTGGATGTCA CGGTCTTGAC GTCGGTGCGA TGGCAGTGTT CCTTTATGCC TTCCGTGATC GTGAAGATAT CTTTGATATG TACGAAGCAG TATCTGGCGC ACGTATGCAT GCTGCTTACT ATCGTCCAGG TGGTGTATAT CGTGATTTGC CAGATCAAAT GGCTCAGTAC GATAAATCTA AGATTCGTAG CGCTTCCGCT GTAAAGCGTT TAAATGAGAA CCGTAGCGGT ACATTGCTTG ATTTTATTGA GCAGTTCGCT AATGGTTTTG ACGCCAATGT TGATGAGTAC TGCAATCTCT TGACAGATAA CCGCATTTGG AAGCAGCGCC TTGTTAACAT TGGTATTGTG ACGCCTAAAC GTGCTTTGCA GCTTGGCTTC ACAGGTCCGA TGTTGCGTGG TTCTGGCATC GAATGGGATT TGCGGAAGAA GCAACCGTAT GAAGTGTATG ACCGTCTCGA CTTTGATATT CCAGTTGGCG TGAACGGCGA TTCTTATGAT CGTTATTTAG TTCGCATGGA AGAAATGCGC CAATCAAATC ACATCATCAA ACAGTGTGTT GCTTGGTTAA AAGCAAATCC AGGCCCTGTA ATGAGCACTA ACCATAAGGT TTCTCCACCG AAGCGCGTGG ATATGAAGAC CAATATGGAG GAATTAATTC ACCATTTCAA ACTCTTTACT GAAGGTATTC ACGTTCCTGA TGGTGAGGCT TACTCTGCTG TTGAACATCC AAAAGGTGAG TTTGGTATCT ACTTGATTTC AGACGGCGCT AATAAGCCAT ACCGTATGAA AATTCGTGCG CCAGGCTTTG TGCATTTATC TTCAATGGAT GAAATGTCAC GTGGCCACAT GTTGGCTGAT GCGGTAACCA TCATTGGCAC GCAAGATATT GTGTTCGGGG AGATTGACCG CTAA
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Protein sequence | MAQIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AKTRTWIQNI PYMDRLDYVS MMSNEHAYVM AIEKLLQVDV PLRAQYIRVM YDELTRLLNH LLWIGCHGLD VGAMAVFLYA FRDREDIFDM YEAVSGARMH AAYYRPGGVY RDLPDQMAQY DKSKIRSASA VKRLNENRSG TLLDFIEQFA NGFDANVDEY CNLLTDNRIW KQRLVNIGIV TPKRALQLGF TGPMLRGSGI EWDLRKKQPY EVYDRLDFDI PVGVNGDSYD RYLVRMEEMR QSNHIIKQCV AWLKANPGPV MSTNHKVSPP KRVDMKTNME ELIHHFKLFT EGIHVPDGEA YSAVEHPKGE FGIYLISDGA NKPYRMKIRA PGFVHLSSMD EMSRGHMLAD AVTIIGTQDI VFGEIDR
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