Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0755 |
Symbol | |
ID | 6183113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 651690 |
End bp | 653213 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671397 |
Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
Protein accession | YP_001797590 |
Protein GI | 171463477 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATA TTAAACAAAA CGACCTCATT CAAAGCGTTG CGGACGCATT TCAATTCATC TCCTACTGCC ATCCCAAGGA CTTCATTACT GCCATGGGAA AAGCATATGA ACTAGAAAAA GGTCATGGTG CAAAAGATGC GATCGCTCAA ATCTTGACCA ATAGCCGAAT GTGCGCTGAA GGCCACCGCC CTCTTTGCCA AGATACTGGC ATTGCCGTAG TTTTTCTCAA AATTGGTATG AATGTACAGT GGCCTGATGC AACAATGAGT GTCACCGACA TGGTGAACGA AGGTGTGCGT CGCGCATACC TAAACCCAGA CAATATGTTG CGCGCCTCAG TATTAAGTGA TCCAGCCGGC AAACGCAAAA ATACTGGTGA CAACACTCCT GCGGTGATTC ATTATGAAAT CGTCCCGGGG GATGATGTTG AAGTAATTTG TGCTGCCAAA GGTGGTGGCT CAGAAAACAA AGCGAAGATG GTCATGCTTA ACCCTTCCGA CTCTATCGTC GATTGGGTTC TTAAAACTGT TCCCACTATG GGTGCAGGCT GGTGCCCTCC TGGCATCCTT GGCATTGGCA TTGGTGGTAC ACCAGAAAAA GCCATGCTCA TGGCAAAAGA ATCGTTGATG GGTCCAGTAG ATATTCAAGA GTTGATTGCT CGCGGCGCTA AAACACGCGC TGAAGAATTA CGCCTCGAAA TCTACGACAA AGTAAACAAG CTGGGCATTG GCGCACAAGG CCTCGGTGGA TTAGCTACCG TACTCGACAT CAAGATCATG GAATACCCAA CCCATGCTGC TTCATTACCA GTAGCAATGA TTCCAAACTG CGCAGCTACT CGTCACGTGC ATTTCCATTT GCATGGTGAT GGCCCAGCAA AATTAGAAGC CCCCTCTCTA TCAGATTGGC CAGATGTCAC TTGGACACCG GATGTTCAAA AATCTAAGCG TGTGAACCTA GATACATTGA CAACTGCGGA AGTGGCTAGC TGGAAACCTG GTGAAACACT ATTACTCAAC GGCAAAATTT TGACCGGCCG CGATGCAGCT CATAAGCGCA TTCAGGATAT GCTTGCTAAA GGCGAAGAAC TGCCAGTGAG CTTTAAAGAT CGTGTGATTT ATTACGTTGG CCCAGTTGAC CCTGTACGCG ATGAAGCAGT TGGCCCTGCA GGCCCTACAA CAGCAACGCG TATGGACAAG TTCACAGAAA TGATGCTGTC TAAAACTGGC TTGATCTCGA TGATTGGTAA AGCAGAACGC GGTCCTGAAG CAATCGAAGC AATTAAGAAA CACAAGTCCG CCTATTTAAT GGCAGTTGGT GGTGCCGCCT ACCTAGTATC CAAGGCTATT CAGACCTCTA AAGTGGTTGG CTTTGCTGAC TTAGGCATGG AAGCAATTTA TGAGTTTGAT GCGAAAGATA TGCCGGTGAC TGTTGCCGTA AACTCAGAGG GCATATCGAT GCACCATGAA GGTCCAAAAG ACTGGCAAGC CAAAATTGCC GGCATTCCAG TCAAGATTGC TTAA
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Protein sequence | MTNIKQNDLI QSVADAFQFI SYCHPKDFIT AMGKAYELEK GHGAKDAIAQ ILTNSRMCAE GHRPLCQDTG IAVVFLKIGM NVQWPDATMS VTDMVNEGVR RAYLNPDNML RASVLSDPAG KRKNTGDNTP AVIHYEIVPG DDVEVICAAK GGGSENKAKM VMLNPSDSIV DWVLKTVPTM GAGWCPPGIL GIGIGGTPEK AMLMAKESLM GPVDIQELIA RGAKTRAEEL RLEIYDKVNK LGIGAQGLGG LATVLDIKIM EYPTHAASLP VAMIPNCAAT RHVHFHLHGD GPAKLEAPSL SDWPDVTWTP DVQKSKRVNL DTLTTAEVAS WKPGETLLLN GKILTGRDAA HKRIQDMLAK GEELPVSFKD RVIYYVGPVD PVRDEAVGPA GPTTATRMDK FTEMMLSKTG LISMIGKAER GPEAIEAIKK HKSAYLMAVG GAAYLVSKAI QTSKVVGFAD LGMEAIYEFD AKDMPVTVAV NSEGISMHHE GPKDWQAKIA GIPVKIA
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