| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0690 |
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| Symbol | |
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| ID | 6183768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 601927 |
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| End bp | 602826 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671344 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_001797539 |
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| Protein GI | 171463426 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.408931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGTCA TTCTGAACTC TGGCGAGGCT TCAGTCAGTC TGATTGATAT GACTACCCGA
CAGGTAATCA AAATAATTCC CGTTGGCAAA GAGCCGCATC ATTTAATGCT TACTCCGGAT
CAAAAAACCT TGTTGATTGC AAACGCGGCT GGCAACGATG TTGTATTGAT GAACCCAACT
ACAGGTGAGT TGACCGGCAA AATCCCCAAC ATCATTGACC CTTACCAAAT TGGATGCTCG
CCTAACCATA AATGGTTTAT CGCAAATGGA AATCGCTTGG ACCGCGTCGA CATTTATGCG
GCTGACGGTG CCAATCTGAA GCTTGCTAAG ACAGTGAAGT TAGCAAAGAC ACCTAGCCAT
ATTGCATTTA CGGCAGATAG TAAAGTTGCA TTCATTACTC TGCAAGATTC AAGTGAGCTC
GCCGCAATTG ATCTTGAGAC GCAAAATGTA TTGTGGGTAA TGCCAACAGG CAAGGTTCCT
GCCGGCCTGT GGATGACGCC AAGCGACCAG TATTTATTGG TGGGCATCAC TGGTGAAGAC
AACGTTCAGG TGATTGACTG GAAAAATCGC AAAGAAGTAA AACGCATCCC TACTGGTAAG
GGCGCCCATA ACTTTCGTCC TTTGGGTGAT AAGAAGCATG TATTCGTGGG TAACCGAATC
GCTTCCACGA TTAGCTTTAT CAATATGCAA ACCCTTGAAA AGGTTGGTGG CATCACTGGT
CTCCCAGCGG GTCCAGATGA TATGGAAATT ACCCCTGACG GTAAAATCCT CTGGGTTACT
TTCCGTTTCT CAAAGAAAGT TGGAGTGATT GATATTCCGA CGATGAAACT AGTCACTGTT
ATCCCGGTTG GAAAATCCCC CCATGGTGTG TTCTTTACCC CAAGGGCTGG ATGGGAGTAA
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| Protein sequence | MAVILNSGEA SVSLIDMTTR QVIKIIPVGK EPHHLMLTPD QKTLLIANAA GNDVVLMNPT
TGELTGKIPN IIDPYQIGCS PNHKWFIANG NRLDRVDIYA ADGANLKLAK TVKLAKTPSH
IAFTADSKVA FITLQDSSEL AAIDLETQNV LWVMPTGKVP AGLWMTPSDQ YLLVGITGED
NVQVIDWKNR KEVKRIPTGK GAHNFRPLGD KKHVFVGNRI ASTISFINMQ TLEKVGGITG
LPAGPDDMEI TPDGKILWVT FRFSKKVGVI DIPTMKLVTV IPVGKSPHGV FFTPRAGWE
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