| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0686 |
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| Symbol | |
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| ID | 6184200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 595883 |
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| End bp | 596593 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671341 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_001797536 |
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| Protein GI | 171463423 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.524796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.609023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG ATCAACTCAA GCAAATGGTA GGTGAGGCGG CCAGAGATGA GGTTCTTAAG
TTGCCTGCTG GACAAGTTTT GGGCGTAGGC ACTGGCTCTA CAGCCAATTA CTTTATTGAT
GCACTTGCCC TGCATAAGGG TCATTTTGCC GGCACGGTAT CTAGCTCGAA TGCGACTACT
GAGCGCTTGC TCAAGCATGG CTTTAAAGTT CTTGACCCTA ATGATGTGCA AGGCTTGCCT
GCATATGTTG ACGGTGCAGA TGAAATTGAT CCAGCCGGGC ACATGATAAA GGGCGGTGGT
GGGGTCCTCA CTGGAGAAAA AATCATTGCT TCTATGGCAA AGCAATTCAT TTGTATTTGT
GACTCCTCTA AACAAGTACC CGTGTTGGGT AACTTTGCAC TGCCAGTGGA AATTATTCCG
CTTTCACAAG GCGTCGTGAG TCGGGAATTA GAAAAGTTTG GCGGTAGGGT GACTTTACGC
TTGGCGAAAC ATACTCGTGC CGATCTCAAT CAAACGCCTA GCGAGCCATT TGTGACGGAT
AACGGCGGAT GGATCCTGGA TGTCGCAGGT CTGCGGATTG CCAGTCCTGC TCAGATGGAA
GCGCAGATTA ATCAAATTGC CGGAGTCATT ACCGTTGGTC TGTTTGCCAA AGAAAAGGCT
AATATTTTGC TAGTTAGCAA TGCTGCTGGA GTCGAAAGAA TTCAGTTTTA G
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| Protein sequence | MNQDQLKQMV GEAARDEVLK LPAGQVLGVG TGSTANYFID ALALHKGHFA GTVSSSNATT
ERLLKHGFKV LDPNDVQGLP AYVDGADEID PAGHMIKGGG GVLTGEKIIA SMAKQFICIC
DSSKQVPVLG NFALPVEIIP LSQGVVSREL EKFGGRVTLR LAKHTRADLN QTPSEPFVTD
NGGWILDVAG LRIASPAQME AQINQIAGVI TVGLFAKEKA NILLVSNAAG VERIQF
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