| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0676 |
|---|
| Symbol | |
|---|
| ID | 6184328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 587097 |
|---|
| End bp | 588437 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641671330 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_001797526 |
|---|
| Protein GI | 171463413 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.678663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAA AGCGGCAAAC CAAAGGTTGT AACGTAGTTG TCATTGGCAC CCAGTGGGGT
GATGAAGGCA AAGGTAAGGT AGTGGATTGG TTAACTGATC ACGCGCAAGC AGTGGTTCGC
TTTCAGGGCG GTCACAATGC GGGTCATACC CTCATCATCG GTGATAAGAA GACGATTTTG
CGTTTGATCC CATCTGGCAT CATGCACAAG ACAGTCATTT GCTACATCGG CAATGGTGTA
GTGTTATCAC CAGAAGCGTT GTTTAAGGAA ATTGGCGAGC TAGAAGCTGC TGGGTTAGAT
GTTCAATCTC GTTTAAAGAT TTCAGAGGCG ACCACTTTGA TTTTGCCGTA TCACGTTGCC
ATCGACCATG CGCGCGAGAA AAAGCGTGGC GAGGCAAAAA TTGGTACAAC TGGTCGCGGT
ATTGGTCCAG CATATGAGGA TAAGGTCGCA CGTCGTGCGC TGCGCGTACA AGATTTATTC
TACCCAGAAA AATTTTCTGA GCAGTTGCGT GAGAATTTGG AGTATCACAA TTTCATGCTC
ACTAATTACT ACGGCGCTGA GCCGGTGAAT TATGAGAAGA CATTGTCTGA AGCAATGTCC
TACGCAGAGC GTCTCAAGCC AATGGTGATG GATGTTTCTA GTGCTTTGTA TGCTGCTGAG
CAATCTGGTC AGAACTTACT ATTCGAAGGT GCGCAAGGCA CATTACTCGA TATCGACCAC
GGCACTTACC CATACGTCAC TTCCAGCAAC TGTGTAGCAG GTAATGCTGC TGCAGGTTCA
GGTGTTGGAC CAGACTCTTT ACAATACATC TTGGGCATTA CTAAAGCCTA TTGCACACGT
GTTGGTGCTG GCCCATTTCC AAGTGAACTC TATGATCATG ACAACCCTGC TAAGCAAGAT
CTGATTGGTA TCCGTTTGGC TGAAGTCGGA AAAGAGTTCG GCTCTGTAAC AGGTCGTCCA
CGTCGTACTG GTTGGCTAGA TGCTGCGGCA TTGAAGCGCT CCATTCAGAT TAATAGCTTA
TCTGGACTCT GTATTACTAA GCTGGATGTT CTAGACGGTC TTGAAACTAT TCGCCTATGC
GTTGGCTACA CATTAGATGG TAAAAAATTA GACATGTTGC CGCGTGGCGC TGAGTCCGTA
GCCCGTTGTG AGCCAATTTA TGAGGACTTC CCAGGCTGGA AGGGCACTAC CTTCGGCATT
CGTGAGTGGG ATAAATTGCC TGTTGAGGCG CAAAAGTTCC TGCGTCGTAT CGAGGAAGTG
GCTGGTAAGC CAATCGCCAT GGTCTCAACT GGCCCTGAGC GCGATGAAAC TATTCTGCTC
CAGCATCCTT TCCAGGATTG A
|
|---|
| Protein sequence | MSSKRQTKGC NVVVIGTQWG DEGKGKVVDW LTDHAQAVVR FQGGHNAGHT LIIGDKKTIL
RLIPSGIMHK TVICYIGNGV VLSPEALFKE IGELEAAGLD VQSRLKISEA TTLILPYHVA
IDHAREKKRG EAKIGTTGRG IGPAYEDKVA RRALRVQDLF YPEKFSEQLR ENLEYHNFML
TNYYGAEPVN YEKTLSEAMS YAERLKPMVM DVSSALYAAE QSGQNLLFEG AQGTLLDIDH
GTYPYVTSSN CVAGNAAAGS GVGPDSLQYI LGITKAYCTR VGAGPFPSEL YDHDNPAKQD
LIGIRLAEVG KEFGSVTGRP RRTGWLDAAA LKRSIQINSL SGLCITKLDV LDGLETIRLC
VGYTLDGKKL DMLPRGAESV ARCEPIYEDF PGWKGTTFGI REWDKLPVEA QKFLRRIEEV
AGKPIAMVST GPERDETILL QHPFQD
|
|---|
| |