| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0673 |
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| Symbol | |
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| ID | 6183922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 583486 |
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| End bp | 584982 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671327 |
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| Product | HflK protein |
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| Protein accession | YP_001797523 |
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| Protein GI | 171463410 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTA AATTTCTAGA TCTATTTTCG GTCAATGATC CAGGTTGGGG CAATAGCCAC
AATTCCGGTG GATCCAAGGA TGCTAAAGAT GGGCAGGGGA GCGATCAAGC CCCCAAAGCG
GATCCCGATA CAAATAAGCC AGTAGAGACT CAGCCTAACA AGCAGCCTGC TAAGCCAGAT
GGCCCCCCAG ATTTAGATGA GCTCTGGCGC GATTTCAATG ACAGAATTGC TGGCATCTTT
GGTGGCAAAA AAATGCCTGG CGCAGCTAAT AAGCCAGCCA ATAAACCGAA TAATGCGGAT
ATTCCTTCGC CCTCACAACG CAATAGTGGA AGCGGCGGCG GTAATGGCGG TATCAATACA
CCCAACTTCA ATTTCAGCAA CCCCTTTGAC TCTAAGGCAA GCATTCTGAT TGCAGGCGCT
ATTGTCTTCT TTATGTGGGT TTGCAGCGGT TTCTTCATTA TTCAGGAAGG GCAGGCTGGC
GTTATTCTGA CTTTTGGTAA ATATGATTAC ACCGCTAAGC CAGGCATTAA TTGGCGCATG
CCTTGGCCAA TTCAATCTGA AGAAACTGTG AACTTATCAG GAGTTCGCTC TGTTGAAGTG
GGTCGTCCAG TATTAATCAA AGCGACAAAT CAAAAAGATT CTTCCATGCT CACCGAAGAT
GAAAACATCA TCGACGTGCG CTTTGCTGTG CAATACCGCT TAAAAGATCC TACTGATTAT
TTGTTTAATA ATCGCGATCC CGAAGCGGCT GTAGTGCAGG CTGCCGAGAC AGCAGTGCGT
GAAATCGTTG CACGCAGCAA GATGGATACC GTTTTGTATG AAGGTCGTGA AAAGATTGGT
GTTGATCTTG CGAATTCGAT CCAGAAGATT TTGGATAGCT ACAAGACTGG CATTTACGTT
ACTAGCGTGA CTGTGCAAAA TGTTCAGCCA CCAGAACAAG TTCAAGCCGC ATTTGATGAT
GCTGTTAAGG CGGGTCAAGA CCAAGAGCGC TTAAAGAGTG AAGGTCAGGC ATATGCGAAT
GACATCATTC CGCGTGCTAA AGGCACTGCT GCACGTCTGA TTCAAGAGGC TGAGGGATAT
AAAGCCCGCG TAGTAGCTAC CGCCGAGGGT GATGCTACAC GCTTCAAGCA GGTATTAGTT
GAATACTCTA AGGCGCCACA AGTTACTCGC GATCGCATGT ATATCGATAG CATGCGTGAA
ATATATAACA ACGTTACTAA GATCTTGGTC GATACAACAA AGAGCAACAG CTTGCTATAC
CTACCGCTCG ACAAGATCGT TGCACAGGTC AGCGCAGAGA GTGCTCAAGC TGCCAATGCG
CAAGTGAGTC AGTCTGGCAC AAGTACGCCA ACTGGCAGTG TGACAGTGGG TGGTGCTACT
GGTGTAAATA CACCAAGCTC TTCATCTAGT TCTGCGCCTG CAACGTCAGC ACCAGTTAAC
AGCAGTTCTG CAGATAAACG TGATGACCTC CGTAGTCGCG ATAGGGAGTC CAGATAA
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| Protein sequence | MTRKFLDLFS VNDPGWGNSH NSGGSKDAKD GQGSDQAPKA DPDTNKPVET QPNKQPAKPD
GPPDLDELWR DFNDRIAGIF GGKKMPGAAN KPANKPNNAD IPSPSQRNSG SGGGNGGINT
PNFNFSNPFD SKASILIAGA IVFFMWVCSG FFIIQEGQAG VILTFGKYDY TAKPGINWRM
PWPIQSEETV NLSGVRSVEV GRPVLIKATN QKDSSMLTED ENIIDVRFAV QYRLKDPTDY
LFNNRDPEAA VVQAAETAVR EIVARSKMDT VLYEGREKIG VDLANSIQKI LDSYKTGIYV
TSVTVQNVQP PEQVQAAFDD AVKAGQDQER LKSEGQAYAN DIIPRAKGTA ARLIQEAEGY
KARVVATAEG DATRFKQVLV EYSKAPQVTR DRMYIDSMRE IYNNVTKILV DTTKSNSLLY
LPLDKIVAQV SAESAQAANA QVSQSGTSTP TGSVTVGGAT GVNTPSSSSS SAPATSAPVN
SSSADKRDDL RSRDRESR
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