Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0592 |
Symbol | |
ID | 6184176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 516413 |
End bp | 517630 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671265 |
Product | HI0933 family protein |
Protein accession | YP_001797461 |
Protein GI | 171463348 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA CCTGGGATGC CATCACTGTC GGTGGCGGGG CTGCAGGCTT ATTTTGCGCT GGAGTTGCCG GTCAGCTAGG CAAGAAAGTG CTTGTGCTCG ACCACGCAGA GGTGCTGGGT GAAAAAATAC GTATCAGTGG CGGTGGTCGC TGTAACTTCA CTAATTTACA CAGTAGCCCA TCCAACTTTT TATCGCTCAA TCAGCATTTT GTTAAAAGTG CATTGGCGAG ATATCCTTCA TCTGAATTCA TTAAGCTCGT GACGTCTTAT CGCATTGGTT ACCACGAAAA ACATCAAGGA CAATTATTTT GCGATGACTC TGCCAAGCAA ATTATTGACA TGCTTTTTTC TGAATGTACT AAGGGTAGGG TGAGCATTCG TAATCCAGTG AGTATTCGGT CTATCGAACA GGTTAATGAT TCGTGGATTG TCAATACGGA TGCCGGAGTT GAAAAGTCCA AGGCGGTTGT GATGGCTACA GGCGGTTTGC CAGTGCCGGC CATTGGCGCA ACGGCCTATT CTTTAGATAT TGCCAAACAG TTTGGGTTAA ATGTTGTTGA GCCAAGGCCC GTTTTAGTGC CGCTCTCATT TACTGCAGAT AATTTTGGTG GCCTCAATGA ATTAGCGGGT CTTAGCGTCC CAGTCAGAAT TGCTTCTGGC TCCAAAGGAC ATCGCTATGG TGCCTGCAGA TTTAATGAGG ACCTATTACT GACTCATAAA GGGCTATCTG GTCCCGCAGT GCTTCAGGCA AGTAGTTATT GGGAAGAGGG TGAGCCTATC CATATTGATT GGCTTGGGGC AATAGAGCGT CCCGGCGGCT TTAATTGCGA TGAACTTTTT AATAATGAAG AGAATCGCTT AAAGTTGACC GAAACGATTT TGGCCTCTGT ACTGCCACAG CGTCTAGCCA AAGCATTTGC AGATCAAAGA AACTTAACAG GTAGAAAATG GGCTGAAGTT TCTAAAAAAG ATCGTCAAGC CCTCAAAGAG CTTATTACAA ACTGGTCTGT AAAGCCTGCG GGCACTCTCG GTTGGAAGAA GGCCGAAGTT ATGTTGGGTG GGGTGGATAC CAAAGAGTTA GATGTGCAAA CCATGATGTC GCGCAAGCAC CAAGGACTTT TCTTTATTGG CGAATGCGTC GATGTCACTG GTCACTTAGG TGGGCATAAC TTCCAGTGGG CCTGGGCCAG TGGATTTGCT TGTGCGCACG CCCTATAA
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Protein sequence | MSKTWDAITV GGGAAGLFCA GVAGQLGKKV LVLDHAEVLG EKIRISGGGR CNFTNLHSSP SNFLSLNQHF VKSALARYPS SEFIKLVTSY RIGYHEKHQG QLFCDDSAKQ IIDMLFSECT KGRVSIRNPV SIRSIEQVND SWIVNTDAGV EKSKAVVMAT GGLPVPAIGA TAYSLDIAKQ FGLNVVEPRP VLVPLSFTAD NFGGLNELAG LSVPVRIASG SKGHRYGACR FNEDLLLTHK GLSGPAVLQA SSYWEEGEPI HIDWLGAIER PGGFNCDELF NNEENRLKLT ETILASVLPQ RLAKAFADQR NLTGRKWAEV SKKDRQALKE LITNWSVKPA GTLGWKKAEV MLGGVDTKEL DVQTMMSRKH QGLFFIGECV DVTGHLGGHN FQWAWASGFA CAHAL
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