Gene Pnec_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0547 
Symbol 
ID6182876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp486769 
End bp487554 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID641671225 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_001797421 
Protein GI171463308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0347407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA AAGCAATACC TGGATTTTTT TGGTTTATTC CACTAGTCCC GCTCGCGCTA 
GCACTCATCA CCTACTTTGG CGACCTGCAA AGCAGCAGCT TTCTATTCAT CAATCAATTA 
ACCCAGCTGC TACCAGACAC ACTTTGGGCT TGGCTCACTT TTTTAGGGAA TGGGTGGGGT 
ATATTTGCCT TAGCTTTTCC GCTGTTATTG CTAGCACCAA GAATGCTCAC GGCAGGTATT 
TTTGCTGGAG TTATTGCAGC AACCACTAGC TCTGTTTTAA AAGGCTTCTT TGATCTCCCA 
AGACCTGCGA GCATCTTGAC CGAAGGAGGT TTTAATCGCA TCGGTGAGGC GCTACTTCAT 
AGAGCCTTTC CTTCTGGCCA TACGTTAACG GCATTTGCCA TTGCAAGCGC CCTCTATTTT 
TCAGCCAATA AAGAGAAGAG AACACCTCTA CTACTGTTGT TTGTGCTCGC TACCTTTGTA 
GGACTATCGC GCAATGCAGT TGGGGCTCAC TGGCTCACCG ATGTCTTGGG GGGTGCAGGA 
TTCGGTATTT GGTGTGGAAT GATTGGAGCT TTATTGGCCA ATCGATTCCC GGAAAGCCAA 
CTAGGGCCAA AAAAGATATG GGCACATTTA ATTGCATTGG GAAGTGTTGT AGCAGCTTAT 
TCTCACCTCA CCCAAATGAT GGATCTCGAA TTGAATCAAC CGTTGCAATA CGCCTCGATA 
GCCATCATCG TAATTACACT TGCATTCTAT GGCAAAGCGC AATTTTCTCA GGCACACCCA 
AAGTGA
 
Protein sequence
MNNKAIPGFF WFIPLVPLAL ALITYFGDLQ SSSFLFINQL TQLLPDTLWA WLTFLGNGWG 
IFALAFPLLL LAPRMLTAGI FAGVIAATTS SVLKGFFDLP RPASILTEGG FNRIGEALLH 
RAFPSGHTLT AFAIASALYF SANKEKRTPL LLLFVLATFV GLSRNAVGAH WLTDVLGGAG 
FGIWCGMIGA LLANRFPESQ LGPKKIWAHL IALGSVVAAY SHLTQMMDLE LNQPLQYASI 
AIIVITLAFY GKAQFSQAHP K