| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0530 |
|---|
| Symbol | guaA |
|---|
| ID | 6183079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 476903 |
|---|
| End bp | 478510 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641671211 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_001797407 |
|---|
| Protein GI | 171463294 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACGACA AAATACTGAT TCTTGATTTT GGTTCGCAAG TAACTCAACT CATTGCTCGC
CGCGTGCGTG ATGGGCGCGT GTACTCAGAG ATCCATCCGT ATGATTGTGA TCCGGAGCTT
ATTCGCAAGT TCATTCAAGA GCAGGGTGGT AAAGGCATCA TCCTTTCTGG TGGTCCGAGT
TCTGTAACTG AAGAAGGTAG TCCTCGTGCG CCACAAATTG TTTTTGAACT TGGCGTTCCA
GTTTTGGGTA TTTGTTACGG CATGCAAACC ATGGCTACCC AGTTAGGTGG GGCCGTCGCT
TCTGCTGAGT CCTTGGGTAA GGCCCGTGAG TTTGGGTATT CAGAAGTGCG CGCCCATGGT
CACACGAATT TGCTTAAAGG CATTCAGGAC TTTTCTACCA GTGAAGGCCA TGGCATTTTG
AAGGTGTGGA TGAGTCATGG CGACTCCGTA ACTACATTGC CGTCATCATT CAAATTGATG
GCCTCGACTG AGTCTTGCCC TATTGCAGGT ATGGCTGATG AAGAGCGTAG TTTCTATGCA
TTCCAGTTTC ACCCTGAAGT AACACATACC ATTCAAGGCA CCGCAATCAT TGAGCGCTTT
GTACATGAGA TTTGCAAGTG CAAGCCTGAT TGGGTAATGG GTGATTACAT CGCAGAGGCT
GTAGAAAATA TTCGCAAACA AGTTGGCGAC GAAGAGGTAA TTCTCGGTTT ATCGGGTGGT
GTTGATTCTA GTGTTGCAGC TGCCTTGATT CATCGAGCGA TTGGCGATCA ACTCACTTGT
GTGTTTGTTG ATCATGGCTT GCTTCGTCTT AATGAAGGCG ATATGGTGAT GGAAATGTTC
GCACGCAATT TAGGTGTGAA AGTCATTCGT GTCGATGCTA AAGAAACTTT TATGGGTGAG
TTAGCCGGCG TTTCTGACCC AGAAGCAAAG CGAAAAATTA TCGGTAAAGA ATTCGTTGAA
ATTTTCCAAG CTGAATCTGG AAAAATCAAA AATGCTAAGT GGCTTGCACA GGGAACCATC
TATCCAGACG TGATTGAGTC TGCTGGTAAG GGCAAGAAGG GCGCGCATAC CATTAAGAGT
CATCATAACG TTGGTGGCTT GCCAGAAGAT ATGCATCTCA AGCTGCTTGA GCCATTGCGT
GAACTTTTTA AAGATGAAGT GCGCGAACTC GGCGTAGCAC TTGGATTGCC TCGTGAGATG
GTGTATCGCC ATCCATTCCC GGGCCCGGGT TTAGGTGTTC GTATCTTAGG TGAAGTGAAG
GCAGAGTTTG CAAGCTTGTT GCAGCGTGCC GATGCTATCT TCATTGAGGA GTTACGCAAT
ACGATTGATG AAGTTAGCCA GAAGTCTTGG TATGACTTAA CTAGCCAAGC CTTTGCTGTA
TTCCTGCCAG TCAAGTCTGT TGGTGTGATG GGTGACGGCA GAACATATGA GTACGTCGTT
GCTTTACGAG CAGTGCAAAC TCAAGACTTT ATGACGGCAC ACTGGGCACA TCTACCGCAT
GAATTGCTAG GTAAGGTATT CAACCGAATC ATTAACGAAG TGCGTGGCAT TAATCGAGTG
GTATACGACA TTAGCGGAAA GCCGCCAGCA ACGATCGAGT GGGAATAA
|
|---|
| Protein sequence | MHDKILILDF GSQVTQLIAR RVRDGRVYSE IHPYDCDPEL IRKFIQEQGG KGIILSGGPS
SVTEEGSPRA PQIVFELGVP VLGICYGMQT MATQLGGAVA SAESLGKARE FGYSEVRAHG
HTNLLKGIQD FSTSEGHGIL KVWMSHGDSV TTLPSSFKLM ASTESCPIAG MADEERSFYA
FQFHPEVTHT IQGTAIIERF VHEICKCKPD WVMGDYIAEA VENIRKQVGD EEVILGLSGG
VDSSVAAALI HRAIGDQLTC VFVDHGLLRL NEGDMVMEMF ARNLGVKVIR VDAKETFMGE
LAGVSDPEAK RKIIGKEFVE IFQAESGKIK NAKWLAQGTI YPDVIESAGK GKKGAHTIKS
HHNVGGLPED MHLKLLEPLR ELFKDEVREL GVALGLPREM VYRHPFPGPG LGVRILGEVK
AEFASLLQRA DAIFIEELRN TIDEVSQKSW YDLTSQAFAV FLPVKSVGVM GDGRTYEYVV
ALRAVQTQDF MTAHWAHLPH ELLGKVFNRI INEVRGINRV VYDISGKPPA TIEWE
|
|---|
| |