Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0491 |
Symbol | |
ID | 6184534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 436545 |
End bp | 437279 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641671174 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_001797371 |
Protein GI | 171463258 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGATCG ATACCCATTG CCATCTAGAT GCTCCGGAGT TTGCGGATTC ATTGCCTACA GTTATTCGTG CGGCTAAAGA AAAAAACGTT AAAGCAATTC TCTTACCGGC TGTAAAGGTG GGTGACTGCG CTCATGTCAA GACATTGGTC TATCAATATA GCCAAGAGAT TCTTGGTTTG GTCTACACCC TTGGGATTCA TCCACTTTAT ACCAATCAGG CGCAAGAAAG TGACATTGCT ACGCTTGAAA AACATATTGT TGAATCACTT TCTGATCCTC GCTTTGTGGG TGTAGGTGAA ATTGGTTTGG ATTATTTTGT GGAAGATTTG GATCCGCATA AACAAGAATT CTTTTTCAAT GCGCAGTTGG ATTTAGCGCA GAAGTATCAA TTGCCTGTCA TCCTACATGT GCGCCGTTCA CAAGATGCAA TCCTAAAAGC TTTGCGTCGT CGCAATATCT CTGGTGGTAT TGCCCATGCT TTTAATGGCA GCTTTCAGCA AGCAGAACAA TTTATTGTGC TTGGATTTAA ATTAGGCTTT GGTGGCGCGG CTACTTATGA GCGTGCCTTG CAAATTCGTA GGCTTCTTAA AGAATTGCCG CTTAATAGCG TTGTGACTGA AACCGATTCA CCTGATATTC CGCCTGCATG GCTCAGAGAA GAAGGCGTTG CGTTTAATGA GCCCGTATTT GTATCGCGGA TTGCACAAGA ATTGGCATTG ATTCGGGGGT ATTGA
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Protein sequence | MWIDTHCHLD APEFADSLPT VIRAAKEKNV KAILLPAVKV GDCAHVKTLV YQYSQEILGL VYTLGIHPLY TNQAQESDIA TLEKHIVESL SDPRFVGVGE IGLDYFVEDL DPHKQEFFFN AQLDLAQKYQ LPVILHVRRS QDAILKALRR RNISGGIAHA FNGSFQQAEQ FIVLGFKLGF GGAATYERAL QIRRLLKELP LNSVVTETDS PDIPPAWLRE EGVAFNEPVF VSRIAQELAL IRGY
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