Gene Pnec_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0471 
Symbol 
ID6184559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp419759 
End bp420082 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID641671155 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_001797352 
Protein GI171463239 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0506099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA CCTTAACTGA TAAAGCAGCC GCGCACGTAA ACCGCAATTT AGAAAAGCGC 
GGCAAAGGTT GTGGCTTGCG TTTGGGCGTT CGCACTACAG GCTGTTCTGG TTTGGCATAT
CAGCTCGAGT ATGTTGACGA ACCAGCTGCT GAAGACCAGG TATTTGAGTC CAATGGCATT
AAGGTCTTCG TAGATCCGAA AAGCTTGGCT TACTTGGACG GTACAGAGTT AGATTTTGTA
CGTGAGGGTT TGAATGAAGG ATTTAAGTTT CAAAATCCAA ACGTAAAGGA TGAGTGTGGT
TGTGGCGAAT CCTTCCGCGT CTGA
 
Protein sequence
MAITLTDKAA AHVNRNLEKR GKGCGLRLGV RTTGCSGLAY QLEYVDEPAA EDQVFESNGI 
KVFVDPKSLA YLDGTELDFV REGLNEGFKF QNPNVKDECG CGESFRV