Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0466 |
Symbol | |
ID | 6184390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 413812 |
End bp | 415011 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671150 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_001797347 |
Protein GI | 171463234 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00128744 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGT TTGCCTCAGT CCAACTAGCC CCTAAAGATC CCATTTTTGG CCTCACAGAA GCCTACGTTG CAGACCAACG CGCTGATAAA GTGAATTTAG GTGTTGGCGT GTATTACACC GACGAAGGCA AGGTTCCATT ATTGAAGGCA GTAATCAAAG CGGAAGAGGC GATTGTTGCC AAGCGCTCAC CGCGCAGCTA TATCCCAATC GAAGGACCCA ATCCTTACAA CAGTGCAGTG CAAAACTTAT TGTTCGGTGC TGACTCCTCA CTCATTAAAG ATGGTCGTGT TGTAACTGCT GAATGTCTTG GTGGCACTGG TGCTTTGCGC GTTGGCGCTG ACTTTATTAA ACGCCTTAAC TTAAATGCAC CTTGTGCGAT TAGCAATCCC ACCTGGGAAA ACCATCGCGG CATTTTTGAA TCTGCTGGCT TTGAAGTGGT TGAGTACACC TATTTCGATG GCAAAACTCG CGGCGTTGAT TTTGATGGCA TGGTGAAGTC TTTAGAGTCT TTCCCAAAGA ACACCACTGT GTTGTTGCAC GCTTGCTGCC ACAACCCAAC AGGCGCAGAT ATTGCTGAGG CGCAATGGCG TCAAGTGATT GATATCTGCA AAAACAAAGG GCTAATTCCT TTCTTAGATA TGGCTTACCA AGGCTTTGCG GCTGGGATTG AGCAGGACGG TGATGCAGTT CGCCTCTTCG CTGAATCAGG CATATCTTTC TTTGTATCGA GCTCTTTCTC CAAGTCATTC TCACTCTATG GTGAACGTGT TGGAGCACTG TCAATCGTGA CACAAAGCAA AGATGAATCC ACTCGCGTAC TCTCACAATT GAAACGTGTG ATTCGTACTA ACTATTCCAA CCCCCCAACT CACGGCGCTG CAATTGCCGC TGCTGTTTTG AATTCACCAG AATTACGTAA GCTCTGGGAA GACGGGTTGG CAGAAATGCG TGACCGCATT AAAGCGATGC GTCATGGTCT AGTTGAAAAG CTCGCTGCTG CTGGTGTAAA GCAAGATTTT GCTTTTATCG AAAAGCAACG TGGCATGTTT TCTTACTCAG GCTTAACAGC TGAGCAAGTT GAGCGCTTAC AGAAAGAAGA TGGCATTTAT GCACTCTCTA CTGGACGCAT TTGTGTGGCA GCTCTCAATA CTAAAAATAT TGATAAAGTC GCTAAAGCAA TCGCCCGCGT CTTAGCGTAA
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Protein sequence | MTLFASVQLA PKDPIFGLTE AYVADQRADK VNLGVGVYYT DEGKVPLLKA VIKAEEAIVA KRSPRSYIPI EGPNPYNSAV QNLLFGADSS LIKDGRVVTA ECLGGTGALR VGADFIKRLN LNAPCAISNP TWENHRGIFE SAGFEVVEYT YFDGKTRGVD FDGMVKSLES FPKNTTVLLH ACCHNPTGAD IAEAQWRQVI DICKNKGLIP FLDMAYQGFA AGIEQDGDAV RLFAESGISF FVSSSFSKSF SLYGERVGAL SIVTQSKDES TRVLSQLKRV IRTNYSNPPT HGAAIAAAVL NSPELRKLWE DGLAEMRDRI KAMRHGLVEK LAAAGVKQDF AFIEKQRGMF SYSGLTAEQV ERLQKEDGIY ALSTGRICVA ALNTKNIDKV AKAIARVLA
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