Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0452 |
Symbol | |
ID | 6184501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 402377 |
End bp | 402631 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671139 |
Product | Excinuclease ABC C subunit domain protein |
Protein accession | YP_001797336 |
Protein GI | 171463223 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000122957 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.760356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCTGGC TTGTTTACCT TCTTGAATGC GCTGATGGCT CGTATTATGC CGGCATTACA AACCACTTAG AACATCGCAT TGAAGCCCAT AATTCAGGAC AAGGTGCACG TTATACGAGA TCACGCAGAC CAGTCATCCT CTTGGCAACC CAAGAGCATC CGGATAGATC GGAAGCCTCA AAAGCAGAGG CAAAACTAAA GCGACTTCCA AGAGCGGAAA AATTGGCATT CTTTAAAGAC AAAAACCACC CATGA
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Protein sequence | MTWLVYLLEC ADGSYYAGIT NHLEHRIEAH NSGQGARYTR SRRPVILLAT QEHPDRSEAS KAEAKLKRLP RAEKLAFFKD KNHP
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