| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0431 |
|---|
| Symbol | rplI |
|---|
| ID | 6184084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 382660 |
|---|
| End bp | 383112 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641671122 |
|---|
| Product | 50S ribosomal protein L9 |
|---|
| Protein accession | YP_001797319 |
|---|
| Protein GI | 171463206 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0359] Ribosomal protein L9 |
|---|
| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 0.740321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCA TTCTTTTAGA AAAAGTAACA AATCTGGGCA ACCTCGGCGA CATCGTTCGC
GTGAAAGACG GTTTCGCTCG TAACTTCTTA ATCCCACAAC GCAAAGCCCG TCGTGCGACT
GAAGCGGCCA TTGCTGACTT TGCTGTTCGT CGTGCTGAGT TGGAGAAATT GGCTGCTGAG
AAATTGGCTG CTGCTGAAGC TGTCGGCATC AAGCTCAAAG ACATGGTTCT CGAAATCGGT
CAAAAAGCGG GTGTTGACGG TCGCTTGTTT GGTTCTGTAA CCAACCATGA CATCGCTGAT
GCTTTGAAAG CCAAAGGTTT CACAATTGAG AAGTCTTCAG TGCGTTTGCC TACTGGTCCA
TTGAAAATGG CTGGTGATCA CCCTGTAGCG GTTGCTGTTC ATACCGACGT AGTTGCAGAT
ATCACTATTC GTGTAGTTGG CGAGCAGGCT TAA
|
|---|
| Protein sequence | MQIILLEKVT NLGNLGDIVR VKDGFARNFL IPQRKARRAT EAAIADFAVR RAELEKLAAE
KLAAAEAVGI KLKDMVLEIG QKAGVDGRLF GSVTNHDIAD ALKAKGFTIE KSSVRLPTGP
LKMAGDHPVA VAVHTDVVAD ITIRVVGEQA
|
|---|
| |